BACH: Grand challenge on breast cancer histology images.

Journal: Medical image analysis
Published Date:

Abstract

Breast cancer is the most common invasive cancer in women, affecting more than 10% of women worldwide. Microscopic analysis of a biopsy remains one of the most important methods to diagnose the type of breast cancer. This requires specialized analysis by pathologists, in a task that i) is highly time- and cost-consuming and ii) often leads to nonconsensual results. The relevance and potential of automatic classification algorithms using hematoxylin-eosin stained histopathological images has already been demonstrated, but the reported results are still sub-optimal for clinical use. With the goal of advancing the state-of-the-art in automatic classification, the Grand Challenge on BreAst Cancer Histology images (BACH) was organized in conjunction with the 15th International Conference on Image Analysis and Recognition (ICIAR 2018). BACH aimed at the classification and localization of clinically relevant histopathological classes in microscopy and whole-slide images from a large annotated dataset, specifically compiled and made publicly available for the challenge. Following a positive response from the scientific community, a total of 64 submissions, out of 677 registrations, effectively entered the competition. The submitted algorithms improved the state-of-the-art in automatic classification of breast cancer with microscopy images to an accuracy of 87%. Convolutional neuronal networks were the most successful methodology in the BACH challenge. Detailed analysis of the collective results allowed the identification of remaining challenges in the field and recommendations for future developments. The BACH dataset remains publicly available as to promote further improvements to the field of automatic classification in digital pathology.

Authors

  • Guilherme Aresta
    Faculdade de Engenharia da Universidade do Porto (FEUP), R. Dr. Roberto Frias s/n, 4200-465 Porto, Portugal.
  • Teresa Araújo
    Faculdade de Engenharia da Universidade do Porto (FEUP), R. Dr. Roberto Frias s/n, 4200-465 Porto, Portugal.
  • Scotty Kwok
    Seek AI Limited, Hong Kong, China.
  • Sai Saketh Chennamsetty
    Bangalore, India.
  • Mohammed Safwan
    Gurgaon, India.
  • Varghese Alex
    Chennai, India.
  • Bahram Marami
    The Center for Computational and Systems Pathology, Department of Pathology, Icahn School of Medicine at Mount Sinai and The Mount Sinai Hospital, New York, USA.
  • Marcel Prastawa
    Department of Pathology, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
  • Monica Chan
    The Center for Computational and Systems Pathology, Department of Pathology, Icahn School of Medicine at Mount Sinai and The Mount Sinai Hospital, New York, USA.
  • Michael Donovan
    Boston Public Health Commission, Boston, MA.
  • Gerardo Fernandez
    Department of Pathology, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
  • Jack Zeineh
    Department of Pathology, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
  • Matthias Kohl
    Konica Minolta Laboratory Europe, Munich, Germany.
  • Christoph Walz
    Institute of Pathology, Faculty of Medicine, LMU Munich, Munich, Germany.
  • Florian Ludwig
    Konica Minolta Laboratory Europe, Munich, Germany.
  • Stefan Braunewell
    Konica Minolta Laboratory Europe, Munich, Germany.
  • Maximilian Baust
    Computer Aided Medical Procedures, Technische Universität München, Garching bei München, 85748, Germany.
  • Quoc Dang Vu
    Department of Computer Science and Engineering, Sejong University, 209 Neungdong-ro, Gwangjin-gu, Seoul 05006, Korea.
  • Minh Nguyen Nhat To
    Department of Computer Science and Engineering, Sejong University, Seoul, 05006, South Korea.
  • Eal Kim
    Department of Computer Science and Engineering, Sejong University, Seoul 05006, Korea.
  • Jin Tae Kwak
    Center for Interventional Oncology, National Institutes of Health, Bethesda, MD, 20892, USA.
  • Sameh Galal
    Chicago, IL, USA.
  • Veronica Sanchez-Freire
    Chicago, IL, USA.
  • Nadia Brancati
    Institute for High Performance Computing and Networking, National Research Council of Italy (ICAR-CNR), Naples, Italy.
  • Maria Frucci
    Institute for High Performance Computing and Networking, National Research Council of Italy (ICAR-CNR), Naples, Italy.
  • Daniel Riccio
    Institute for High Performance Computing and Networking, National Research Council of Italy (ICAR-CNR), Naples, Italy; University of Naples "Federico II", Naples, Italy.
  • Yaqi Wang
    Key Laboratory of RF Circuits and Systems, Ministry of Education, Hangzhou Dianzi University, Hangzhou 310018, China.
  • Lingling Sun
    Key Laboratory of RF Circuits and Systems, Ministry of Education, Hangzhou Dianzi University, Hangzhou 310018, China; Zhejiang Provincial Laboratory of Integrated Circuits Design, Hangzhou Dianzi University, Hangzhou 310018, China.
  • Kaiqiang Ma
    Key Laboratory of RF Circuits and Systems, Ministry of Education, Hangzhou Dianzi University, Hangzhou 310018, China.
  • Jiannan Fang
    Key Laboratory of RF Circuits and Systems, Ministry of Education, Hangzhou Dianzi University, Hangzhou 310018, China.
  • Ismael Kone
    2MIA Research Group, LEM2A Lab, Faculté des Sciences, Université Moulay Ismail, Meknes, Morocco.
  • Lahsen Boulmane
    2MIA Research Group, LEM2A Lab, Faculté des Sciences, Université Moulay Ismail, Meknes, Morocco.
  • Aurélio Campilho
    Faculdade de Engenharia da Universidade do Porto (FEUP), R. Dr. Roberto Frias s/n, 4200-465 Porto, Portugal.
  • Catarina Eloy
    Laboratório de Anatomia Patológica, Ipatimup Diagnósticos, Rua Júlio Amaral de Carvalho, 45, 4200-135 Porto, Portugal.
  • António Polónia
    Laboratório de Anatomia Patológica, Ipatimup Diagnósticos, Rua Júlio Amaral de Carvalho, 45, 4200-135 Porto, Portugal.
  • Paulo Aguiar
    Instituto de Investigação e Inovação em Saúde (i3S), Universidade do Porto, Rua Alfredo Allen, 208, 4200-135 Porto, Portugal.