Breast pectoral muscle segmentation in mammograms using a modified holistically-nested edge detection network.

Journal: Medical image analysis
Published Date:

Abstract

This paper presents a method for automatic breast pectoral muscle segmentation in mediolateral oblique mammograms using a Convolutional Neural Network (CNN) inspired by the Holistically-nested Edge Detection (HED) network. Most of the existing methods in the literature are based on hand-crafted models such as straight-line, curve-based techniques or a combination of both. Unfortunately, such models are insufficient when dealing with complex shape variations of the pectoral muscle boundary and when the boundary is unclear due to overlapping breast tissue. To compensate for these issues, we propose a neural network framework that incorporates multi-scale and multi-level learning, capable of learning complex hierarchical features to resolve spatial ambiguity in estimating the pectoral muscle boundary. For this purpose, we modified the HED network architecture to specifically find 'contour-like' objects in mammograms. The proposed framework produced a probability map that can be used to estimate the initial pectoral muscle boundary. Subsequently, we process these maps by extracting morphological properties to find the actual pectoral muscle boundary. Finally, we developed two different post-processing steps to find the actual pectoral muscle boundary. Quantitative evaluation results show that the proposed method is comparable with alternative state-of-the-art methods producing on average values of 94.8 ± 8.5% and 97.5 ± 6.3% for the Jaccard and Dice similarity metrics, respectively, across four different databases.

Authors

  • Andrik Rampun
    School of Computing, Ulster University, Coleraine, Northern Ireland, United Kingdom. Electronic address: y.rampun@ulster.ac.uk.
  • Karen López-Linares
    Vicomtech Foundation, San Sebastián, Spain; Biodonostia Health Research Institute, San Sebastián, Spain; Universitat Pompeu Fabra, Barcelona, Spain. Electronic address: klopez@vicomtech.org.
  • Philip J Morrow
    School of Computing, Ulster University, Coleraine, Northern Ireland, BT52 1SA, UK.
  • Bryan W Scotney
    School of Computing, Ulster University, Coleraine, Northern Ireland, BT52 1SA, UK.
  • Hui Wang
    Department of Vascular Surgery, Xuanwu Hospital, Capital Medical University, Beijing, China.
  • Inmaculada Garcia Ocaña
    Vicomtech Foundation, San Sebastián, Spain.
  • Gregory Maclair
    Vicomtech Foundation, San Sebastián, Spain; Biodonostia Health Research Institute, San Sebastián, Spain.
  • Reyer Zwiggelaar
    Department of Computer Science, Aberystwyth University, Ceredigion, United Kingdom.
  • Miguel A González Ballester
    Department of Information and Communication Technologies, Universitat Pompeu Fabra, Tànger 122-140, Barcelona 08018, Spain; ICREA, Pg. Lluis Companys 23, Barcelona 08010 Spain.
  • Iván Macía
    Vicomtech Foundation, San Sebastián, Spain; Biodonostia Health Research Institute, San Sebastián, Spain.