Weakly-supervised learning for lung carcinoma classification using deep learning.

Journal: Scientific reports
Published Date:

Abstract

Lung cancer is one of the major causes of cancer-related deaths in many countries around the world, and its histopathological diagnosis is crucial for deciding on optimum treatment strategies. Recently, Artificial Intelligence (AI) deep learning models have been widely shown to be useful in various medical fields, particularly image and pathological diagnoses; however, AI models for the pathological diagnosis of pulmonary lesions that have been validated on large-scale test sets are yet to be seen. We trained a Convolution Neural Network (CNN) based on the EfficientNet-B3 architecture, using transfer learning and weakly-supervised learning, to predict carcinoma in Whole Slide Images (WSIs) using a training dataset of 3,554 WSIs. We obtained highly promising results for differentiating between lung carcinoma and non-neoplastic with high Receiver Operator Curve (ROC) area under the curves (AUCs) on four independent test sets (ROC AUCs of 0.975, 0.974, 0.988, and 0.981, respectively). Development and validation of algorithms such as ours are important initial steps in the development of software suites that could be adopted in routine pathological practices and potentially help reduce the burden on pathologists.

Authors

  • Fahdi Kanavati
    Medmain Research, Medmain Inc., Fukuoka, 810-0042, Japan.
  • Gouji Toyokawa
    Department of Thoracic Surgery, Clinical Research Institute, National Hospital Organization, Kyushu Medical Center, Fukuoka, 810-8563, Japan.
  • Seiya Momosaki
    Department of Pathology, Clinical Research Institute, National Hospital Organization, Kyushu Medical Center, Fukuoka, 810-8563, Japan.
  • Michael Rambeau
    Medmain Inc., Fukuoka, 810-0042, Japan.
  • Yuka Kozuma
    Department of Thoracic Surgery, Clinical Research Institute, National Hospital Organization, Kyushu Medical Center, Fukuoka, 810-8563, Japan.
  • Fumihiro Shoji
    Department of Thoracic Surgery, Clinical Research Institute, National Hospital Organization, Kyushu Medical Center, Fukuoka, 810-8563, Japan.
  • Koji Yamazaki
    Department of Thoracic Surgery, Clinical Research Institute, National Hospital Organization, Kyushu Medical Center, Fukuoka, 810-8563, Japan.
  • Sadanori Takeo
    Department of Thoracic Surgery, Clinical Research Institute, National Hospital Organization, Kyushu Medical Center, Fukuoka, 810-8563, Japan.
  • Osamu Iizuka
    Medmain Inc., Fukuoka, 810-0042, Japan.
  • Masayuki Tsuneki
    Medmain Research, Medmain Inc., Fukuoka, 810-0042, Japan. tsuneki@medmain.com.