Deep learning based automatic diagnosis of first-episode psychosis, bipolar disorder and healthy controls.

Journal: Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society
PMID:

Abstract

Neuroimaging data driven machine learning based predictive modeling and pattern recognition has been attracted strongly attention in biomedical sciences. Machine learning based diagnosis techniques are widely applied in diagnosis of neurological diseases. However, machine learning techniques are difficult to effectively extract deep information in neuroimaging data, resulting in low classification accuracy of mental illnesses. To address this problem, we propose a deep learning based automatic diagnosis first-episode psychosis (FEP), bipolar disorder (BD) and healthy controls (HC) method. Specifically, we design a convolutional neural network (CNN) framework to automatically diagnosis based on structural magnetic functional imaging (sMRI). Our dataset consists of 89 FEP patients, 40 BD patients and 83 HC. A three-way classifier (FEP vs. BD vs. HC) and three binary classifiers (FEP vs. BD, FEP vs. HC, BD vs. HC) are trained based on their gray matter volume images. Experiment results show that the performance of CNN-based method outperforms the classic classifiers both in two and three categories classification task. Our research reveals that abnormal gray matter volume is one of the main characteristics for discriminating FEP, BD and HC.

Authors

  • Zhuangzhuang Li
    College of Telecommunication and Information Engineering, Nanjing University of Posts and Telecommunications, Nanjing 210003, China.
  • Wenmei Li
    College of Telecommunication and Information Engineering, Nanjing University of Posts and Telecommunications, Nanjing 210003, China; School of Geographic and Biologic Information, Nanjing University of Posts and Telecommunications, Nanjing 210023, China. Electronic address: liwm@njupt.edu.cn.
  • Yan Wei
    Zhejiang Key Laboratory for Agro-Food Processing, Zhejiang R &D Center for Food Technology and Equipment, Fuli Institute of Food Science, Zhejiang University, Hangzhou 310058, Zhejiang, China.
  • Guan Gui
    College of Telecommunication and Information Engineering, Nanjing University of Posts and Telecommunications, Nanjing 210003, China. Electronic address: guiguan@njupt.edu.cn.
  • Rongrong Zhang
    Department of Psychiatry Affiliated Nanjing Brain Hospital, Nanjing Medical University, Nanjing 210029, China.
  • Haiyan Liu
    Department of Neurology, Xinyang Central Hospital, Xinyang 464000, China.
  • Yuchen Chen
    Departments of Bioengineering (H.C.L.), Pediatrics (A.G., Y.C., C.L., K.T.B., S.K.N.), Medicine (W.W., S.K.N.), Cellular and Molecular Medicine (S.K.N.), and Pharmacology (R.A.), and the San Diego Supercomputer Center (N.B., P.R.), University of California San Diego, La Jolla, California.
  • Yiqiu Jiang
    Department of Orthopedics, Nanjing First Hospital, Nanjing Medical University, Nanjing 210006, China.