A few-shot U-Net deep learning model for lung cancer lesion segmentation via PET/CT imaging.

Journal: Biomedical physics & engineering express
Published Date:

Abstract

Over the past few years, positron emission tomography/computed tomography (PET/CT) imaging for computer-aided diagnosis has received increasing attention. Supervised deep learning architectures are usually employed for the detection of abnormalities, with anatomical localization, especially in the case of CT scans. However, the main limitations of the supervised learning paradigm include (i) large amounts of data required for model training, and (ii) the assumption of fixed network weights upon training completion, implying that the performance of the model cannot be further improved after training. In order to overcome these limitations, we apply a few-shot learning (FSL) scheme. Contrary to traditional deep learning practices, in FSL the model is provided with less data during training. The model then utilizes end-user feedback after training to constantly improve its performance. We integrate FSL in a U-Net architecture for lung cancer lesion segmentation on PET/CT scans, allowing for dynamic model weight fine-tuning and resulting in an online supervised learning scheme. Constant online readjustments of the model weights according to the users' feedback, increase the detection and classification accuracy, especially in cases where low detection performance is encountered. Our proposed method is validated on the Lung-PET-CT-DX TCIA database. PET/CT scans from 87 patients were included in the dataset and were acquired 60 minutes after intravenousF-FDG injection. Experimental results indicate the superiority of our approach compared to other state-of-the-art methods.

Authors

  • Nicholas E Protonotarios
    Department of Applied Mathematics & Theoretical Physics, University of Cambridge, United Kingdom.
  • Iason Katsamenis
    School of Rural and Surveying Engineering, National Technical University of Athens, 15780 Athens, Greece.
  • Stavros Sykiotis
    School of Rural & Surveying Engineering, National Technical University of Athens, Greece.
  • Nikolaos Dikaios
    Centre for Medical Imaging, University College London, 2nd Floor Charles Bell House, 43-45 Foley Street, London, W1W 7TS, UK.
  • George A Kastis
    Mathematics Research Center, Academy of Athens, Greece.
  • Sofia N Chatziioannou
    PET/CT Department, Biomedical Research Foundation Academy of Athens, Greece.
  • Marinos Metaxas
    PET/CT Department, Biomedical Research Foundation Academy of Athens, Greece.
  • Nikolaos Doulamis
    National Technical University of Athens, 15780 Athens, Greece.
  • Anastasios Doulamis
    National Technical University of Athens, 15780 Athens, Greece.