FcTC-UNet: Fine-grained Combination of Transformer and CNN for Thoracic Organs Segmentation.

Journal: Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
Published Date:

Abstract

Precise segmentation of organs at risk (OARs) in computed tomography (CT) images is an essential step for lung cancer radiotherapy. However, the manual delineation of OARs is time-consuming and subject to inter-observer variation. Although U-like architecture has achieved great success in medical image segmentation recently, it exhibits the limitations in modeling long-range dependencies. As an alternative structure, Transformers have emerged due to the outstanding capability of capturing the global contextual information provided by Self-Attention(SA) mechanism. However, Transformers need more computational cost than CNNs for introducing the SA module. In this paper, we propose a novel module named fine-grained combination of Transformer and CNN(FcTC). FcTC module is composed of dual-path extractor and fusing unit to effectively extract local information and model long-distance dependency. Then we build FcTC-UNet to automatically segment the OARs in thoracic CT images. The experiments results demonstrate that the proposed method achieves better performance over other state-of-the-art methods.

Authors

  • Liang Qiao
    Department of Chemistry, Shanghai Stomatological Hospital, and Institutes of Biomedical Sciences, Fudan University, Shanghai, 200000, China. liang_qiao@fudan.edu.cn.
  • Qiang Liu
    Blood Transfusion Laboratory, Jiangxi Provincial Blood Center Nanchang 330052, Jiangxi, China.
  • Jun Shi
    School of Communication and Information Engineering, Shanghai University, Shanghai, China. Electronic address: junshi@staff.shu.edu.cn.
  • Minfan Zhao
    School of Computer Science and Technology, University of Science and Technology of China, Hefei, Anhui, China.
  • Hongyu Kan
  • Zhaohui Wang
    Department of Plastic Surgery, Second Affiliated Hospital of Nanchang University, Nanchang Jiangxi, 330006, P.R.China.
  • Hong An
    546497School of Computer Science and Technology, 12652University of Science and Technology of China, Hefei, 117556Anhui, China.
  • Chenguang Xiao
  • Shuo Wang
    College of Tea & Food Science, Anhui Agricultural University, Hefei, China.