POPDx: an automated framework for patient phenotyping across 392 246 individuals in the UK Biobank study.

Journal: Journal of the American Medical Informatics Association : JAMIA
PMID: 36469791

Abstract

OBJECTIVE: For the UK Biobank, standardized phenotype codes are associated with patients who have been hospitalized but are missing for many patients who have been treated exclusively in an outpatient setting. We describe a method for phenotype recognition that imputes phenotype codes for all UK Biobank participants.

Authors

  • Lu Yang
    Division of Mood Disorders, Shanghai Mental Health Center, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
  • Sheng Wang
    Intensive Care Medical Center, Tongji Hospital, School of Medicine, Tongji University, Shanghai, 200065, People's Republic of China.
  • Russ B Altman
    Departments of Medicine, Genetics and Bioengineering, Stanford University, Stanford, California, United States of America.

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