Enhanced Spatial Fuzzy C-Means Algorithm for Brain Tissue Segmentation in T1 Images.

Journal: Neuroinformatics
PMID:

Abstract

Magnetic Resonance Imaging (MRI) plays an important role in neurology, particularly in the precise segmentation of brain tissues. Accurate segmentation is crucial for diagnosing brain injuries and neurodegenerative conditions. We introduce an Enhanced Spatial Fuzzy C-means (esFCM) algorithm for 3D T1 MRI segmentation to three tissues, i.e. White Matter (WM), Gray Matter (GM), and Cerebrospinal Fluid (CSF). The esFCM employs a weighted least square algorithm utilizing the Structural Similarity Index (SSIM) for polynomial bias field correction. It also takes advantage of the information from the membership function of the last iteration to compute neighborhood impact. This strategic refinement enhances the algorithm's adaptability to complex image structures, effectively addressing challenges such as intensity irregularities and contributing to heightened segmentation accuracy. We compare the segmentation accuracy of esFCM against four variants of FCM, Gaussian Mixture Model (GMM) and FSL and ANTs algorithms using four various dataset, employing three measurement criteria. Comparative assessments underscore esFCM's superior performance, particularly in scenarios involving added noise and bias fields.The obtained results emphasize the significant potential of the proposed method in the segmentation of MRI images.

Authors

  • Bahram Jafrasteh
    Biomedical Research and Innovation Institute of Cádiz (INiBICA), Puerta del Mar University, Cádiz, Spain. Electronic address: jafrasteh.bahram@inibica.es.
  • Manuel Lubián-Gutiérrez
    Biomedical Research and Innovation Institute of Cádiz (INiBICA) Research Unit, Puerta del Mar University Hospital, Cádiz, 11008, Spain.
  • Simón Pedro Lubián-López
    Biomedical Research and Innovation Institute of Cádiz (INiBICA), Puerta del Mar University, Cádiz, Spain; Division of Neonatology, Department of Paediatrics, Puerta del Mar University Hospital, Cádiz, Spain. Electronic address: simonp.lubian.sspa@juntadeandalucia.es.
  • Isabel Benavente-Fernández
    Department of Pediatrics (Neonatology), Biomedical Research and Innovation Institute of Cádiz (INiBICA) Research Unit, Puerta del Mar Hospital, Ana de Viya Avenue 21, 11009, Cádiz, Spain. isabel.benavente.sspa@juntadeandalucia.es.