Sex classification from functional brain connectivity: Generalization to multiple datasets.

Journal: Human brain mapping
Published Date:

Abstract

Machine learning (ML) approaches are increasingly being applied to neuroimaging data. Studies in neuroscience typically have to rely on a limited set of training data which may impair the generalizability of ML models. However, it is still unclear which kind of training sample is best suited to optimize generalization performance. In the present study, we systematically investigated the generalization performance of sex classification models trained on the parcelwise connectivity profile of either single samples or compound samples of two different sizes. Generalization performance was quantified in terms of mean across-sample classification accuracy and spatial consistency of accurately classifying parcels. Our results indicate that the generalization performance of parcelwise classifiers (pwCs) trained on single dataset samples is dependent on the specific test samples. Certain datasets seem to "match" in the sense that classifiers trained on a sample from one dataset achieved a high accuracy when tested on the respected other one and vice versa. The pwCs trained on the compound samples demonstrated overall highest generalization performance for all test samples, including one derived from a dataset not included in building the training samples. Thus, our results indicate that both a large sample size and a heterogeneous data composition of a training sample have a central role in achieving generalizable results.

Authors

  • Lisa Wiersch
    Institute of Systems Neuroscience, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.
  • Patrick Friedrich
    Institute of Systems Neuroscience, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.
  • Sami Hamdan
    Institute of Neuroscience and Medicine, Brain and Behaviour (INM-7), Forschungszentrum Jülich, 52428 Jülich, Germany.
  • Vera Komeyer
    Institute of Systems Neuroscience, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.
  • Felix Hoffstaedter
    7Institute for Systems Neuroscience, Medical Faculty, Heinrich-Heine University, Dusseldorf, Germany.
  • Kaustubh R Patil
    Institute of Neuroscience and Medicine, Brain and Behaviour (INM-7), Forschungszentrum Jülich, 52428 Jülich, Germany.
  • Simon B Eickhoff
    Institute of Neuroscience and Medicine (INM-1, INM-3), Research Centre Jülich, Jülich, Germany.
  • Susanne Weis
    Institute of Neuroscience and Medicine, Brain and Behaviour (INM-7), Forschungszentrum Jülich, 52428 Jülich, Germany.