Siamese Graph Convolutional Network quantifies increasing structure-function discrepancy over the cognitive decline continuum.

Journal: Computer methods and programs in biomedicine
PMID:

Abstract

BACKGROUND AND OBJECTIVE: Alzheimer's disease dementia (ADD) is well known to induce alterations in both structural and functional brain connectivity. However, reported changes in connectivity are mostly limited to global/local network features, which have poor specificity for diagnostic purposes. Following recent advances in machine learning, deep neural networks, particularly Graph Neural Network (GNN) based approaches, have found applications in brain research as well. The majority of existing applications of GNNs employ a single network (uni-modal or structure/function unified), despite the widely accepted view that there is a nontrivial interdependence between the brain's structural connectivity and the neural activity patterns, which is hypothesized to be disrupted in ADD. This disruption is quantified as a discrepancy score by the proposed "structure-function discrepancy learning network" (sfDLN) and its distribution is studied over the spectrum of clinical cognitive decline. The measured discrepancy score is utilized as a diagnostic biomarker and is compared with state-of-the-art diagnostic classifiers.

Authors

  • Gurur Gamgam
    VAVlab, Department of Electrical And Electronics Eng., Bogazici University, Istanbul, 34342, Turkiye.
  • Zerrin Yıldırım
    Department of Neuroscience, Aziz Sancar Institute of Experimental Medicine, Istanbul University, Istanbul, 34093, Turkiye.
  • Alkan Kabakçıoğlu
    Department of Physics, Koç University, Istanbul, 34450, Turkiye.
  • Hakan Gurvit
    Department of Neurology, Istanbul Faculty of Medicine, Istanbul University, Istanbul, 34093, Turkiye.
  • Tamer Demiralp
    Hulusi Behçet Life Sciences Research Lab., Istanbul University, Istanbul, 34093, Turkiye.
  • Burak Açar
    Türkiye Yüksek Ihtisas Training and Research Hospital, Cardiology Clinic, Ankara, Turkey.