Machine learning-assisted matrix-assisted laser desorption/ionization time-of-flight mass spectrometry toward rapid classification of milk products.

Journal: Journal of dairy science
Published Date:

Abstract

This study established a method for rapid classification of milk products by combining MALDI-TOF MS analysis with machine learning techniques. The analysis of 2 different types of milk products was used as an example. To select key variables as potential markers, integrated machine learning strategies based on 6 feature selection techniques combined with support vector machine (SVM) classifier were implemented to screen the informative features and classify the milk samples. The models were evaluated and compared by accuracy, Akaike information criterion (AIC), and Bayesian information criterion (BIC). The results showed the least absolute shrinkage and selection operator (LASSO) combined with SVM performs best, with prediction accuracy of 100% ± 0%, AIC of -360 ± 22, and BIC of -345 ± 22. Six features were selected by LASSO and identified based on the available protein molecular mass data. These results indicate that MALDI-TOF MS coupled with machine learning technique could be used to search for potential key targets for authentication and quality control of food products.

Authors

  • Yaju Zhao
    Zhejiang Engineering Research Institute of Food & Drug Quality and Safety, Zhejiang Gongshang University, Hangzhou 310018, P.R. China. Electronic address: zyj@zjgsu.edu.cn.
  • Hang Yuan
    Department of Medical Affairs, MSD (China) Co., Ltd., Shanghai, China.
  • Danke Xu
    State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, P.R. China.
  • Zhengyong Zhang
    School of Management Science and Engineering, Nanjing University of Finance and Economics, Nanjing 210023, P.R. China.
  • Yinsheng Zhang
    College of Biomedical Engineering and Instrument Science, Zhejiang University, The Key Laboratory of Biomedical Engineering, Ministry of Education, Hangzhou, China.
  • Haiyan Wang
    College of Chemistry and Material Science, Shandong Agricultural University, Tai'an 271018, PR China.