Image-based recognition of parasitoid wasps using advanced neural networks.

Journal: Invertebrate systematics
PMID:

Abstract

Hymenoptera has some of the highest diversity and number of individuals among insects. Many of these species potentially play key roles as food sources, pest controllers and pollinators. However, little is known about the diversity and biology and ~80% of the species have not yet been described. Classical taxonomy based on morphology is a rather slow process but DNA barcoding has already brought considerable progress in identification. Innovative methods such as image-based identification and automation can further speed up the process. We present a proof of concept for image data recognition of a parasitic wasp family, the Diapriidae (Hymenoptera), obtained as part of the GBOL III project. These tiny (1.2-4.5mm) wasps were photographed and identified using DNA barcoding to provide a solid ground truth for training a neural network. Taxonomic identification was used down to the genus level. Subsequently, three different neural network architectures were trained, evaluated and optimised. As a result, 11 different genera of diaprids and one mixed group of 'other Hymenoptera' can be classified with an average accuracy of 96%. Additionally, the sex of the specimen can be classified automatically with an accuracy of >97%.

Authors

  • Hossein Shirali
    Institute for Automation and Applied Informatics (IAI), Karlsruhe Institute of Technology (KIT), D-76149 Karlsruhe, Germany.
  • Jeremy Hübner
    Zoologische Staatssammlung München, Münchhausenstraße 21, D-81247 Munich, Germany.
  • Robin Both
    Institute for Automation and Applied Informatics (IAI), Karlsruhe Institute of Technology (KIT), D-76149 Karlsruhe, Germany.
  • Michael Raupach
    Zoologische Staatssammlung München, Münchhausenstraße 21, D-81247 Munich, Germany.
  • Markus Reischl
    Institut für Automation und angewandte Informatik, Karlsruher Institut für Technologie, Eggenstein-Leopoldshafen.
  • Stefan Schmidt
    Heidelberg Engineering GmbH, 69115, Heidelberg, Germany.
  • Christian Pylatiuk
    Institute for Automation and Applied Informatics (IAI), Karlsruhe Institute of Technology (KIT), Eggenstein, Germany.