Although species are central units for biological research, recent findings in genomics are raising awareness that what we call species can be ill-founded entities due to solely morphology-based, regional species descriptions. This particularly appli...
Taxonomic profiling of microbial communities is essential to model microbial interactions and inform habitat conservation. This work develops approaches in constructing training/testing data sets from publicly available marine metagenomes and evaluat...
Computational and mathematical methods in medicine
Jan 18, 2022
Music style is one of the important labels for music classification, and the current music style classification methods extract features such as rhythm and timbre of music and use classifiers to achieve classification. The classification accuracy is ...
Journal of computational biology : a journal of computational molecular cell biology
Jan 5, 2022
Deep neural networks (DNNs) have been recently proposed for quartet tree phylogeny estimation. Here, we present a study evaluating recently trained DNNs in comparison to a collection of standard phylogeny estimation methods on a heterogeneous collect...
Computational and mathematical methods in medicine
Nov 16, 2021
Word embedding models have recently shown some capability to encode hierarchical information that exists in textual data. However, such models do not explicitly encode the hierarchical structure that exists among words. In this work, we propose a met...
International journal of legal medicine
Jul 20, 2021
Diatom test is one of the commonly used diagnostic methods for drowning in forensic pathology, which provides supportive evidence for drowning. However, in forensic practice, it is time-consuming and laborious for forensic experts to classify and cou...
Computational and mathematical methods in medicine
May 11, 2021
For the low optimization accuracy of the cuckoo search algorithm, a new search algorithm, the Elite Hybrid Binary Cuckoo Search (EHBCS) algorithm, is improved by feature weighting and elite strategy. The EHBCS algorithm has been designed for feature ...
Neural networks : the official journal of the International Neural Network Society
Apr 19, 2021
We present a stochastic first-order optimization algorithm, named block-cyclic stochastic coordinate descent (BCSC), that adds a cyclic constraint to stochastic block-coordinate descent in the selection of both data and parameters. It uses different ...
Neural networks : the official journal of the International Neural Network Society
Mar 6, 2021
This paper presents a neural system to deal with multi-label classification problems that might involve sparse features. The architecture of this model involves three sequential blocks with well-defined functions. The first block consists of a multil...
Neural networks : the official journal of the International Neural Network Society
Feb 24, 2021
Although zero-shot learning (ZSL) has an inferential capability of recognizing new classes that have never been seen before, it always faces two fundamental challenges of the cross modality and cross-domain challenges. In order to alleviate these pro...
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