AIMC Topic: Base Pairing

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UFold: fast and accurate RNA secondary structure prediction with deep learning.

Nucleic acids research Feb 22, 2022
For many RNA molecules, the secondary structure is essential for the correct function of the RNA. Predicting RNA secondary structure from nucleotide sequences is a long-standing problem in genomics, but the prediction performance has reached a platea...
Humans Algorithms Deep Learning RNA Nucleic Acid Conformation Base Pairing
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Chiron: translating nanopore raw signal directly into nucleotide sequence using deep learning.

GigaScience May 1, 2018
Sequencing by translocating DNA fragments through an array of nanopores is a rapidly maturing technology that offers faster and cheaper sequencing than other approaches. However, accurately deciphering the DNA sequence from the noisy and complex elec...
Neural Networks, Computer Machine Learning Software Reproducibility of Results Escherichia coli Sequence Analysis, DNA Signal Processing, Computer-Assisted Nucleotides Mycobacterium tuberculosis Probability Base Sequence Base Pairing Nanopores
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