AIMC Topic: Drug Interactions

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A Molecular Fragment Representation Learning Framework for Drug-Drug Interaction Prediction.

Interdisciplinary sciences, computational life sciences
The concurrent use of multiple drugs may result in drug-drug interactions, increasing the risk of adverse reactions. Hence, it is particularly crucial to propose computational methods for precisely identifying unknown drug-drug interactions, which is...

A Network Enhancement Method to Identify Spurious Drug-Drug Interactions.

IEEE/ACM transactions on computational biology and bioinformatics
As medical safety and drug regulation gain heightened attention, the detection of spurious drug-drug interactions (DDI) has become key in healthcare. Although current research using graph neural networks (GNNs) to predict DDI has shown impressive res...

RECOMED: A comprehensive pharmaceutical recommendation system.

Artificial intelligence in medicine
OBJECTIVES: To build datasets containing useful information from drug databases and recommend a list of drugs to physicians and patients with high accuracy by considering a wide range of features of people, diseases, and chemicals.

DSIL-DDI: A Domain-Invariant Substructure Interaction Learning for Generalizable Drug-Drug Interaction Prediction.

IEEE transactions on neural networks and learning systems
Drug-drug interactions (DDIs) trigger unexpected pharmacological effects in vivo, often with unknown causal mechanisms. Deep learning methods have been developed to better understand DDI. However, learning domain-invariant representations for DDI rem...

Central-Smoothing Hypergraph Neural Networks for Predicting Drug-Drug Interactions.

IEEE transactions on neural networks and learning systems
Predicting drug-drug interactions (DDIs) is the problem of predicting side effects (unwanted outcomes) of a pair of drugs using drug information and known side effects of many pairs. This problem can be formulated as predicting labels (i.e., side eff...

BiRNN-DDI: A Drug-Drug Interaction Event Type Prediction Model Based on Bidirectional Recurrent Neural Network and Graph2Seq Representation.

Journal of computational biology : a journal of computational molecular cell biology
Research on drug-drug interaction (DDI) prediction, particularly in identifying DDI event types, is crucial for understanding adverse drug reactions and drug combinations. This work introduces a Bidirectional Recurrent Neural Network model for DDI ev...

Gtie-Rt: A comprehensive graph learning model for predicting drugs targeting metabolic pathways in human.

Journal of bioinformatics and computational biology
Drugs often target specific metabolic pathways to produce a therapeutic effect. However, these pathways are complex and interconnected, making it challenging to predict a drug's potential effects on an organism's overall metabolism. The mapping of dr...

PT-KGNN: A framework for pre-training biomedical knowledge graphs with graph neural networks.

Computers in biology and medicine
Biomedical knowledge graphs (KGs) serve as comprehensive data repositories that contain rich information about nodes and edges, providing modeling capabilities for complex relationships among biological entities. Many approaches either learn node fea...

Accurate prediction of drug combination risk levels based on relational graph convolutional network and multi-head attention.

Journal of translational medicine
BACKGROUND: Accurately identifying the risk level of drug combinations is of great significance in investigating the mechanisms of combination medication and adverse reactions. Most existing methods can only predict whether there is an interaction be...

Knowledge enhanced attention aggregation network for medicine recommendation.

Computational biology and chemistry
The combination of deep learning and the medical field has recently achieved great success, particularly in recommending medicine for patients. However, patients' clinical records often contain repeated medical information that can significantly impa...