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Drug Interactions

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Drug-Protein Interactions Prediction Models Using Feature Selection and Classification Techniques.

Current drug metabolism
BACKGROUND: Drug-Protein Interaction (DPI) identification is crucial in drug discovery. The high dimensionality of drug and protein features poses challenges for accurate interaction prediction, necessitating the use of computational techniques. Dock...

CCL-DTI: contributing the contrastive loss in drug-target interaction prediction.

BMC bioinformatics
BACKGROUND: The Drug-Target Interaction (DTI) prediction uses a drug molecule and a protein sequence as inputs to predict the binding affinity value. In recent years, deep learning-based models have gotten more attention. These methods have two modul...

MFD-GDrug: multimodal feature fusion-based deep learning for GPCR-drug interaction prediction.

Methods (San Diego, Calif.)
The accurate identification of drug-protein interactions (DPIs) is crucial in drug development, especially concerning G protein-coupled receptors (GPCRs), which are vital targets in drug discovery. However, experimental validation of GPCR-drug pairin...

SSF-DDI: a deep learning method utilizing drug sequence and substructure features for drug-drug interaction prediction.

BMC bioinformatics
BACKGROUND: Drug-drug interactions (DDI) are prevalent in combination therapy, necessitating the importance of identifying and predicting potential DDI. While various artificial intelligence methods can predict and identify potential DDI, they often ...

Antibiotic combinations prediction based on machine learning to multicentre clinical data and drug interaction correlation.

International journal of antimicrobial agents
BACKGROUND: With increasing antibiotic resistance and regulation, the issue of antibiotic combination has been emphasised. However, antibiotic combination prescribing lacks a rapid identification of feasibility, while its risk of drug interactions is...

HormoNet: a deep learning approach for hormone-drug interaction prediction.

BMC bioinformatics
Several experimental evidences have shown that the human endogenous hormones can interact with drugs in many ways and affect drug efficacy. The hormone drug interactions (HDI) are essential for drug treatment and precision medicine; therefore, it is ...

Screening oral drugs for their interactions with the intestinal transportome via porcine tissue explants and machine learning.

Nature biomedical engineering
In vitro systems that accurately model in vivo conditions in the gastrointestinal tract may aid the development of oral drugs with greater bioavailability. Here we show that the interaction profiles between drugs and intestinal drug transporters can ...

Multimodal CNN-DDI: using multimodal CNN for drug to drug interaction associated events.

Scientific reports
Drug-to-drug interaction (DDIs) occurs when a patient consumes multiple drugs. Therefore, it is possible that any medication can influence other drugs' effectiveness. The drug-to-drug interactions are detected based on the interactions of chemical su...

A low-cost machine learning framework for predicting drug-drug interactions based on fusion of multiple features and a parameter self-tuning strategy.

Physical chemistry chemical physics : PCCP
Poly-drug therapy is now recognized as a crucial treatment, and the analysis of drug-drug interactions (DDIs) offers substantial theoretical support and guidance for its implementation. Predicting potential DDIs using intelligent algorithms is an eme...

iNGNN-DTI: prediction of drug-target interaction with interpretable nested graph neural network and pretrained molecule models.

Bioinformatics (Oxford, England)
MOTIVATION: Drug-target interaction (DTI) prediction aims to identify interactions between drugs and protein targets. Deep learning can automatically learn discriminative features from drug and protein target representations for DTI prediction, but c...