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Ecosystem

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Assessing the potential for deep learning and computer vision to identify bumble bee species from images.

Scientific reports
Pollinators are undergoing a global decline. Although vital to pollinator conservation and ecological research, species-level identification is expensive, time consuming, and requires specialized taxonomic training. However, deep learning and compute...

Combining natural language processing and metabarcoding to reveal pathogen-environment associations.

PLoS neglected tropical diseases
Cryptococcus neoformans is responsible for life-threatening infections that primarily affect immunocompromised individuals and has an estimated worldwide burden of 220,000 new cases each year-with 180,000 resulting deaths-mostly in sub-Saharan Africa...

Boundaries Between Research Ethics and Ethical Research Use in Artificial Intelligence Health Research.

Journal of empirical research on human research ethics : JERHRE
The governance of ethically acceptable research in higher education institutions has been under scrutiny over the past half a century. Concomitantly, recently, decision makers have required researchers to acknowledge the societal impact of their rese...

Quantification of chlorophyll-a in typical lakes across China using Sentinel-2 MSI imagery with machine learning algorithm.

The Science of the total environment
Lake eutrophication has attracted the attention of the government and general public. Chlorophyll-a (Chl-a) is a key indicator of algal biomass and eutrophication. Many efforts have been devoted to establishing accurate algorithms for estimating Chl-...

Unsupervised manifold learning of collective behavior.

PLoS computational biology
Collective behavior is an emergent property of numerous complex systems, from financial markets to cancer cells to predator-prey ecological systems. Characterizing modes of collective behavior is often done through human observation, training generat...

Mask R-CNN and OBIA Fusion Improves the Segmentation of Scattered Vegetation in Very High-Resolution Optical Sensors.

Sensors (Basel, Switzerland)
Vegetation generally appears scattered in drylands. Its structure, composition and spatial patterns are key controls of biotic interactions, water, and nutrient cycles. Applying segmentation methods to very high-resolution images for monitoring chang...

Machine learning models for wetland habitat vulnerability in mature Ganges delta.

Environmental science and pollution research international
The present study attempts to measure wetland habitat vulnerability (WHV) in the Indian part of mature Ganges delta. Predictive algorithms belonging to bivariate statistics and machine learning (ML) algorithms were applied for fulfilling the data min...

C-Norm: a neural approach to few-shot entity normalization.

BMC bioinformatics
BACKGROUND: Entity normalization is an important information extraction task which has gained renewed attention in the last decade, particularly in the biomedical and life science domains. In these domains, and more generally in all specialized domai...

Transforming the study of organisms: Phenomic data models and knowledge bases.

PLoS computational biology
The rapidly decreasing cost of gene sequencing has resulted in a deluge of genomic data from across the tree of life; however, outside a few model organism databases, genomic data are limited in their scientific impact because they are not accompanie...

A comparison of two remotely operated vehicle (ROV) survey methods used to estimate fish assemblages and densities around a California oil platform.

PloS one
Offshore oil and gas platforms have a finite life of production operations. Once production ceases, decommissioning options for the platform are assessed. The role that a platform's jacket plays as fish habitat can inform the decommissioning decision...