AIMC Topic: Neural Networks, Computer

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[A protein complex recognition method based on spatial-temporal graph convolution neural network].

Nan fang yi ke da xue xue bao = Journal of Southern Medical University
OBJECTIVE: To propose a new method for mining complexes in dynamic protein network using spatiotemporal convolution neural network.

De novo molecular design with deep molecular generative models for PPI inhibitors.

Briefings in bioinformatics
We construct a protein-protein interaction (PPI) targeted drug-likeness dataset and propose a deep molecular generative framework to generate novel drug-likeness molecules from the features of the seed compounds. This framework gains inspiration from...

A deep learning method for predicting metabolite-disease associations via graph neural network.

Briefings in bioinformatics
Metabolism is the process by which an organism continuously replaces old substances with new substances. It plays an important role in maintaining human life, body growth and reproduction. More and more researchers have shown that the concentrations ...

BatchDTA: implicit batch alignment enhances deep learning-based drug-target affinity estimation.

Briefings in bioinformatics
Candidate compounds with high binding affinities toward a target protein are likely to be developed as drugs. Deep neural networks (DNNs) have attracted increasing attention for drug-target affinity (DTA) estimation owning to their efficiency. Howeve...

Generating and screening de novo compounds against given targets using ultrafast deep learning models as core components.

Briefings in bioinformatics
Deep learning is an artificial intelligence technique in which models express geometric transformations over multiple levels. This method has shown great promise in various fields, including drug development. The availability of public structure data...

STNN-DDI: a Substructure-aware Tensor Neural Network to predict Drug-Drug Interactions.

Briefings in bioinformatics
Computational prediction of multiple-type drug-drug interaction (DDI) helps reduce unexpected side effects in poly-drug treatments. Although existing computational approaches achieve inspiring results, they ignore to study which local structures of d...

A heterogeneous network-based method with attentive meta-path extraction for predicting drug-target interactions.

Briefings in bioinformatics
Predicting drug-target interactions (DTIs) is crucial at many phases of drug discovery and repositioning. Many computational methods based on heterogeneous networks (HNs) have proved their potential to predict DTIs by capturing extensive biological k...

Hyperspectral image super-resolution based on the transfer of both spectra and multi-level features.

Optics letters
Existing hyperspectral image (HSI) super-resolution methods fusing a high-resolution RGB image (HR-RGB) and a low-resolution HSI (LR-HSI) always rely on spatial degradation and handcrafted priors, which hinders their practicality. To address these pr...

3D medical images security via light-field imaging.

Optics letters
This Letter proposes a selective encryption scheme for three-dimensional (3D) medical images using light-field imaging and two-dimensional (2D) Moore cellular automata (MCA). We first utilize convolutional neural networks (CNNs) to obtain the salienc...

Differential Geometry Methods for Constructing Manifold-Targeted Recurrent Neural Networks.

Neural computation
Neural computations can be framed as dynamical processes, whereby the structure of the dynamics within a neural network is a direct reflection of the computations that the network performs. A key step in generating mechanistic interpretations within ...