AIMC Topic: Type III Secretion Systems

Clear Filters Showing 1 to 3 of 3 articles

Characterizing Secretion System Effector Proteins With Structure-Aware Graph Neural Networks and Pre-Trained Language Models.

IEEE journal of biomedical and health informatics Sep 5, 2024
The Type III Secretion Systems (T3SSs) play a pivotal role in host-pathogen interactions by mediating the secretion of type III secretion system effectors (T3SEs) into host cells. These T3SEs mimic host cell protein functions, influencing interaction...
Humans Neural Networks, Computer Computational Biology Bacterial Proteins Type III Secretion Systems
View on PubMed DOI

iT3SE-PX: Identification of Bacterial Type III Secreted Effectors Using PSSM Profiles and XGBoost Feature Selection.

Computational and mathematical methods in medicine Jan 6, 2021
Identification of bacterial type III secreted effectors (T3SEs) has become a popular research topic in the field of bioinformatics due to its crucial role in understanding host-pathogen interaction and developing better therapeutic targets against th...
Machine Learning Algorithms Computational Biology Support Vector Machine Databases, Protein Amino Acid Sequence Position-Specific Scoring Matrices Type III Secretion Systems
View on PubMed DOI

ACNNT3: Attention-CNN Framework for Prediction of Sequence-Based Bacterial Type III Secreted Effectors.

Computational and mathematical methods in medicine Apr 3, 2020
The type III secretion system (T3SS) is a special protein delivery system in Gram-negative bacteria which delivers T3SS-secreted effectors (T3SEs) to host cells causing pathological changes. Numerous experiments have verified that T3SEs play importan...
Neural Networks, Computer Deep Learning Computational Biology Databases, Protein Bacterial Proteins Amino Acid Sequence Gram-Negative Bacteria Host Microbial Interactions Type III Secretion Systems
View on PubMed DOI
Popular Topics
Recent Journals