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Type III Secretion Systems

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ACNNT3: Attention-CNN Framework for Prediction of Sequence-Based Bacterial Type III Secreted Effectors.

Computational and mathematical methods in medicine 32328150
The type III secretion system (T3SS) is a special protein delivery system in Gram-negative bacteria which delivers T3SS-secreted effectors (T3SEs) to host cells causing pathological changes. Numerous experiments have verified that T3SEs play importan...
Amino Acid Sequence Bacterial Proteins Computational Biology Databases, Protein Deep Learning Gram-Negative Bacteria Host Microbial Interactions Neural Networks, Computer Type III Secretion Systems
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iT3SE-PX: Identification of Bacterial Type III Secreted Effectors Using PSSM Profiles and XGBoost Feature Selection.

Computational and mathematical methods in medicine 33505516
Identification of bacterial type III secreted effectors (T3SEs) has become a popular research topic in the field of bioinformatics due to its crucial role in understanding host-pathogen interaction and developing better therapeutic targets against th...
Algorithms Amino Acid Sequence Computational Biology Databases, Protein Machine Learning Position-Specific Scoring Matrices Support Vector Machine Type III Secretion Systems
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Characterizing Secretion System Effector Proteins With Structure-Aware Graph Neural Networks and Pre-Trained Language Models.

IEEE journal of biomedical and health informatics 38865232
The Type III Secretion Systems (T3SSs) play a pivotal role in host-pathogen interactions by mediating the secretion of type III secretion system effectors (T3SEs) into host cells. These T3SEs mimic host cell protein functions, influencing interaction...
Bacterial Proteins Computational Biology Humans Neural Networks, Computer Type III Secretion Systems
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