DCA-Enhanced Alzheimer's detection with shearlet and deep learning integration.

Journal: Computers in biology and medicine
PMID:

Abstract

Alzheimer's dementia (AD) is a neurodegenerative disorder that affects the central nervous system, causing the cells to stop working or die. The quality of life for individuals with AD steadily declines over time. While current treatments can relieve symptoms, a definitive cure remains elusive. However, technological advancements in machine learning (ML) and deep learning (DL) have opened up new possibilities for early AD detection. Early diagnosis is crucial, as trial drugs show promising results in patients who are diagnosed early. This study used a magnetic resonance imaging (MRI) dataset from the Alzheimer's Disease Neuroimaging Initiative (ADNI). The dataset consisted of 200 patients who were followed up at different time points and categorized as having AD (50), progressive-mild cognitive impairment to AD (50), stable-mild cognitive impairment (50), or cognitively normal (50). However, the utilization of MRI datasets poses challenges such as high dimensionality, limited training samples, and variability within and between subjects. To overcome these challenges, I propose using convolutional neural networks (CNNs) to extract informative features from an MRI sample. I fine-tune four pretrained models (i.e., SqueezeNet-v1.1, MobileNet-v2, Xception, and Inception-v3) to generate discriminative descriptors of MRI sample characteristics. Additionally, I suggest using the 3D shearlet transform, considering the volumetric properties of MRI data. Before the transformation, I implemented preprocessing protocols such as skull stripping, normalization of image intensity, and spatial cropping. I then summarize the shearlet coefficients using texture-based techniques. Finally, I integrate both deep and shearlet-based features using discriminant correlation analysis (DCA) to yield a robust and computationally efficient classification model. I employ two classifiers, support vector machines (SVMs) and decision tree baggers (DTBs). My objective was to develop a model capable of accurately diagnosing early-stage AD that can facilitate effective intervention and management of the condition. Our feature representation demonstrated high accuracy when applied to AD datasets at three time points. Specifically, accuracies of 94.46%, 92.97%, and 95.44% were achieved 18 months, 12 months, and at the time of stable diagnosis, respectively.

Authors

  • Sadiq Alinsaif
    EECS, University of Ottawa, Ottawa, Canada. salin025@uottawa.ca.