Raman Spectroscopy and Exosome-Based Machine Learning Predicts the Efficacy of Neoadjuvant Therapy for HER2-Positive Breast Cancer.

Journal: Analytical chemistry
PMID:

Abstract

Early prediction of the neoadjuvant therapy efficacy for HER2-positive breast cancer is crucial for personalizing treatment and enhancing patient outcomes. Exosomes, which play a role in tumor development and treatment response, are emerging as potential biomarkers for cancer diagnosis and efficacy prediction. Despite their promise, current exosome detection and isolation methods are cumbersome and time-consuming and often yield limited purity and quantity. In this study, we employed Raman spectroscopy to analyze the molecular changes in exosomes from the sera of HER2-positive breast cancer patients before and after two cycles of neoadjuvant therapy. Utilizing machine learning techniques (PCA, LDA, and SVM), we developed a predictive model with an AUC value exceeding 0.89. Additionally, we introduced an innovative HER2-positive exosome capture and detection system, termed Magnetic beads@HER2-Exos@HER2-SERS detection nanoprobes (HER2-MEDN). This system enabled us to efficiently extract and analyze HER2-positive exosomes, refining our predictive model to achieve an accuracy greater than 0.94. Our study has demonstrated the potential of the HER2-MEDN system in accurately predicting early treatment response, offering novel insights and methodologies for assessing the efficacy of neoadjuvant therapy in HER2-positive breast cancer.

Authors

  • Yining Jia
    Department of Breast Surgery, The Second Hospital of Shandong University, Jinan, Shandong 250033, China.
  • Yongqi Li
    Department of Breast Surgery, The Second Hospital of Shandong University, Jinan, Shandong 250033, China.
  • Xintong Bai
    School of Mathematics, Shandong University, Jinan, Shandong 250100, China.
  • Liyuan Liu
    State Key Laboratory of Superlattices and Microstructures, Institute of Semiconductors, Chinese Academy of Sciences, Beijing 100083, China.
  • Ying Shan
    School of Electronic Engineering, Beijing University of Posts and Telecommunications, Beijing, China.
  • Fei Wang
    Department of Population Health Sciences, Weill Cornell Medicine, Cornell University, New York, NY, United States.
  • Zhigang Yu
    Department of Biomedical Engineering, ShenZhen University, ShenZhen, 518000, China.
  • Chao Zheng
    School of Biomedical Engineering, Southern Medical University, Guangzhou, Guangdong 510515 People's Republic of China.