Machine learning-based prognostic subgrouping of glioblastoma: A multicenter study.

Journal: Neuro-oncology
PMID:

Abstract

BACKGROUND: Glioblastoma (GBM) is the most aggressive adult primary brain cancer, characterized by significant heterogeneity, posing challenges for patient management, treatment planning, and clinical trial stratification.

Authors

  • Hamed Akbari
    Center for Biomedical Image Computing and Analytics, University of Pennsylvania, Philadelphia.
  • Spyridon Bakas
    Perelman School of Medicine, Philadelphia, PA, USA.
  • Chiharu Sako
    Center for Biomedical Image Computing and Analytics.
  • Anahita Fathi Kazerooni
    Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
  • Javier Villanueva-Meyer
    Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, California, USA.
  • Jose A Garcia
    Center for Data Science and AI for Integrated Diagnostics (AI2D), and Center for Biomedical Image Computing and Analytics (CBICA), University of Pennsylvania, Philadelphia, Pennsylvania, USA.
  • Elizabeth Mamourian
    Artificial Intelligence in Biomedical Imaging Laboratory (AIBIL), Center for and Data Science for Integrated Diagnostics (AID), Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
  • Fang Liu
    The First Clinical Medical College of Gannan Medical University, Ganzhou 341000, Jiangxi Province, China.
  • Quy Cao
    Department of Biostatistics, Epidemiology, and Informatics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
  • Russell T Shinohara
    Artificial Intelligence in Biomedical Imaging Laboratory (AIBIL), Center for and Data Science for Integrated Diagnostics (AID), Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
  • Ujjwal Baid
    Perelman School of Medicine, Philadelphia, PA, USA.
  • Alexander Getka
    Center for Data Science and AI for Integrated Diagnostics (AI2D), and Center for Biomedical Image Computing and Analytics (CBICA), University of Pennsylvania, Philadelphia, Pennsylvania, USA.
  • Sarthak Pati
    Perelman School of Medicine, Philadelphia, PA, USA.
  • Ashish Singh
    Artificial Intelligence in Biomedical Imaging Lab, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
  • Evan Calabrese
    Department of Radiology and Biomedical Imaging, University of California At San Francisco, 350 Parnassus Ave, Suite 307H, San Francisco, CA, 94143-0628, USA. evan.calabrese@ucsf.edu.
  • Susan Chang
    Department of Neurological Surgery, University of California San Francisco, San Francisco, California, USA.
  • Jeffrey Rudie
    Department of Radiology, University of California San Diego, San Diego, California, USA.
  • Aristeidis Sotiras
    Department of Radiology and Institute of Informatics, Washington University in St. Luis, St. Luis, MO63110, USA.
  • Pamela LaMontagne
    Mallinckrodt Institute of Radiology, Washington University School of Medicine, St. Louis, MO, USA.
  • Daniel S Marcus
    Mallinckrodt Institute of Radiology, Washington University School of Medicine, St. Louis, MO, USA.
  • Mikhail Milchenko
    Department of Radiology, Washington University School of Medicine, St. Louis, Missouri, USA.
  • Arash Nazeri
    From the Department of Bioengineering, Rice University, Houston, Tex (S. Fan); Department of Radiology (S. Fan, M.R.P., P.X., S.M.H., J.J.L., S. Flores, P.L., B.G., C.A.R., D.S.M., A.N., T.L.S.B., A.S.), Charles F. and Joanne Knight Alzheimer Disease Research Center (B.G., B.M.A., R.B., J.C.M., T.L.S.B.), Department of Neurology (C.A.R., B.M.A., R.J.B., J.C.M.), and Institute for Informatics, Data Science and Biostatistics (A.S.), Washington University School of Medicine, 660 S Euclid Ave, Campus Box 8132, St Louis, MO 63110; Duke-NUS Medical School, Singapore (S. Fan); Department of Electrical and Systems Engineering, Washington University in St Louis, St Louis, Mo (S.C., A.S.); Brain Health Imaging Centre, Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, Toronto, Canada (A.N.); and Tracy Family SILQ Center for Neurodegenerative Biology, St Louis, Mo (R.J.B.).
  • Carmen Balana
    B-ARGO Group, Institut Investigació Germans Trias i Pujol (IGTP), Badalona (Barcelona), Catalonia, Spain.
  • Jaume Capellades
    Research Unit (IDIR), Image Diagnosis Institute, Badalona, Spain.
  • Josep Puig
    Research Unit of Diagnostic Imaging Institute (IDI), Department of Radiology (Girona Biomedical Research Institute) IDIBGI, Hospital Universitari Dr. Josep Trueta, 17007 Girona, Spain.
  • Chaitra Badve
    Department of Radiology, Case Western Reserve University and University Hospitals of Cleveland, Cleveland, Ohio, USA.
  • Jill S Barnholtz-Sloan
    Case Comprehensive Cancer Center, Case Western Reserve University School of Medicine, Cleveland, OH 44106.
  • Andrew E Sloan
    Brain and Tumor Neurosurgery, Neurosurgical Oncology, Piedmont Health, Atlanta, Georgia, USA.
  • Vachan Vadmal
    Department of Population and Quantitative Health Sciences, Case Western Reserve University School of Medicine, Cleveland, Ohio, USA.
  • Kristin Waite
    Center for Biomedical Informatics and Information Technology (CBIIT), National Cancer Institute, Bethesda, Maryland, USA.
  • Murat Ak
    Department of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
  • Rivka R Colen
    Department of Diagnostic Radiology, University of Texas MD Anderson Cancer Center, Houston, TX, USA.
  • Yae Won Park
    Department of Radiology, Ewha Womans University College of Medicine, Seoul, Korea.
  • Sung Soo Ahn
    Department of Radiology, Severance Hospital, Research Institute of Radiological Science and Center for Clinical Image Data Science, Yonsei University College of Medicine, Seoul, Korea. sungsoo@yuhs.ac.
  • Jong Hee Chang
    Department of Neurosurgery, Yonsei University College of Medicine, Seoul, South Korea.
  • Yoon Seong Choi
    Department of Radiology and Research Institute of Radiological Science, Yonsei University College of Medicine, 50-1 Yonsei-ro, Seodaemun-gu, Seoul, 120-752, South Korea.
  • Seung-Koo Lee
    Department of Radiology and Research Institute of Radiological Science, Yonsei University College of Medicine, 50-1 Yonsei-ro, Seodaemun-gu, Seoul, 120-752, South Korea.
  • Gregory S Alexander
    Department of Radiation Oncology, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, Pennsylvania, USA.
  • Ayesha S Ali
    Department of Radiation Oncology, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, Pennsylvania, USA.
  • Adam P Dicker
    Shivank Garg, Noelle L. Williams, and Adam P. Dicker, Sidney Kimmel Medical College at Thomas Jefferson University Philadelphia, PA; and Andrew Ip, Winship Cancer Institute at Emory University, Atlanta, GA.
  • Adam E Flanders
  • Spencer Liem
    Department of Radiation Oncology, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, Pennsylvania, USA.
  • Joseph Lombardo
    Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, Pennsylvania, USA.
  • Wenyin Shi
    Department of Radiation Oncology, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, Pennsylvania, USA.
  • Gaurav Shukla
    Center for Biomedical Image Computing and Analytics, University of Pennsylvania, Philadelphia, Pennsylvania.
  • Brent Griffith
    Department of Radiology, Henry Ford Hospital, Detroit, MI, USA.
  • Laila M Poisson
    Department of Public Health Sciences, Center for Bioinformatics, Henry Ford Health System, Detroit, Michigan, USA.
  • Lisa R Rogers
    Department of Neurosurgery, Hermelin Brain Tumor Center, Henry Ford Cancer Institute, Henry Ford Health, Detroit, Michigan, USA.
  • Aikaterini Kotrotsou
    MD Anderson Cancer Center, University of Texas, Houston, Texas, USA.
  • Thomas C Booth
    School of Biomedical Engineering and Imaging Sciences, King's College London, St. Thomas' Hospital, London, United Kingdom.
  • Rajan Jain
    1 Department of Radiology, New York University Langone Medical Center, 660 1st Ave, Rm 336, New York, NY 10016.
  • Matthew Lee
    Department of Urology, Lewis Katz School of Medicine, Temple University, Philadelphia, PA, USA.
  • Abhishek Mahajan
    Department of Imaging, The Clatterbridge Cancer Centre NHS Foundation Trust, Liverpool L7 8YA, UK.
  • Arnab Chakravarti
    Department of Radiation Oncology, The James Cancer Hospital at the Ohio State University Wexner Medical Center, Columbus, Ohio, USA.
  • Joshua D Palmer
    Department of Radiation Oncology, The James Cancer Hospital and Solove Research Institute at the Ohio State University, Columbus, Ohio.
  • Dominic DiCostanzo
    Department of Radiation Oncology, The James Cancer Hospital at the Ohio State University Wexner Medical Center, Columbus, Ohio, USA.
  • Hassan Fathallah-Shaykh
    Department of Neurology, The University of Alabama at Birmingham, Birmingham, Alabama, USA.
  • Santiago Cepeda
    Neurosurgery Department, Rio Hortega University Hospital, 47012 Valladolid, Spain.
  • Orazio Santo Santonocito
    Division of Neurosurgery, Spedali Riuniti di Livorno-Azienda USL Toscana Nord-Ovest, Livorno, Italy.
  • Anna Luisa Di Stefano
    Division of Neurosurgery, Spedali Riuniti di Livorno-Azienda USL Toscana Nord-Ovest, Livorno, Italy.
  • Benedikt Wiestler
    Department of Neuroradiology, Klinikum rechts der Isar, Technical University of Munich (TUM), Ismaninger Straße 22, 81675 Munich, Germany; Deutsches Konsortium für Translationale Krebsforschung (DKTK), Partner Site Munich, Germany.
  • Elias R Melhem
    Department of Diagnostic Radiology and Nuclear Medicine, University of Maryland School of Medicine, Baltimore, Maryland, USA.
  • Graeme F Woodworth
    Department of Diagnostic Radiology and Nuclear Medicine, University of Maryland School of Medicine, Baltimore, Maryland, USA.
  • Pallavi Tiwari
    Department of Radiology, University of Wisconsin, Madison, WI, USA.
  • Pablo Valdes
    Department of Neurosurgery, University of Texas Medical Branch, Galveston, Texas, USA.
  • Yuji Matsumoto
    Department of Applied Chemistry, School of Engineering, Tohoku University, Sendai, Miyagi 980-8579, Japan.
  • Yoshihiro Otani
    Department of Neurological Surgery, Okayama University, Okayama, Japan.
  • Ryoji Imoto
    Department of Neurological Surgery, Okayama University, Okayama, Japan.
  • Mariam Aboian
    Department of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT.
  • Shinichiro Koizumi
    Department of Neurosurgery, Hamamatsu University School of Medicine, Hamamatsu, Shizuoka, Japan.
  • Kazuhiko Kurozumi
    Department of Neurosurgery, Hamamatsu University School of Medicine, Hamamatsu, Shizuoka, Japan.
  • Toru Kawakatsu
    Department of Neurosurgery, Hamamatsu University School of Medicine, Hamamatsu, Shizuoka, Japan.
  • Kimberley Alexander
    Department of Neurosurgery, Chris O'Brien Lifehouse, Camperdown, Australia.
  • Laveniya Satgunaseelan
    Department of Neurosurgery, Chris O'Brien Lifehouse, Camperdown, Australia.
  • Aaron M Rulseh
    Department of Radiology, Na Homolce Hospital, Prague, Czechia.
  • Stephen J Bagley
    Department of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.
  • Michel Bilello
    Center for Biomedical Image Computing and Analytics, University of Pennsylvania, Philadelphia, Pennsylvania.
  • Zev A Binder
    Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
  • Steven Brem
    Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.
  • Arati S Desai
    Department of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.
  • Robert A Lustig
    Department of Radiation-Oncology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
  • Eileen Maloney
    Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
  • Timothy Prior
    Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
  • Nduka Amankulor
    Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
  • MacLean P Nasrallah
    Department of Pathology and Laboratory Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.
  • Donald M O'Rourke
    Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.
  • Suyash Mohan
    Department of Radiology, Hospital of the University of Pennsylvania, 3400 Spruce St, Philadelphia, PA 19104 (J.D.R., L.X., A.K., J.M.E., T.C., I.M.N., S.M., J.C.G.); Department of Radiology and Biomedical Imaging, University of California, San Francisco, San Francisco, Calif (J.D.R., A.M.R.); Penn Image Computing and Science Laboratory, University of Pennsylvania, Philadelphia, Pa (X.L., J.W.); University of Pennsylvania Perelman School of Medicine, Philadelphia, Pa (M.T.D.); Mecklenburg Radiology Associates, Charlotte, NC (E.J.B.); Department of Radiology, University of Texas, Austin, Tex (R.N.B.); and Division of Nuclear Medicine and Clinical Molecular Imaging, Department of Radiology, University of Pennsylvania, Philadelphia, Pa (I.M.N.).
  • Christos Davatzikos
    Artificial Intelligence in Biomedical Imaging Laboratory (AIBIL), Center for and Data Science for Integrated Diagnostics (AID), Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.