MDAL: Modality-difference-based active learning for multimodal medical image analysis via contrastive learning and pointwise mutual information.

Journal: Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society
Published Date:

Abstract

Multimodal medical images reveal different characteristics of the same anatomy or lesion, offering significant clinical value. Deep learning has achieved widespread success in medical image analysis with large-scale labeled datasets. However, annotating medical images is expensive and labor-intensive for doctors, and the variations between different modalities further increase the annotation cost for multimodal images. This study aims to minimize the annotation cost for multimodal medical image analysis. We proposes a novel active learning framework MDAL based on modality differences for multimodal medical images. MDAL quantifies the sample-wise modality differences through pointwise mutual information estimated by multimodal contrastive learning. We hypothesize that samples with larger modality differences are more informative for annotation and further propose two sampling strategies based on these differences: MaxMD and DiverseMD. Moreover, MDAL could select informative samples in one shot without initial labeled data. We evaluated MDAL on public brain glioma and meningioma segmentation datasets and an in-house ovarian cancer classification dataset. MDAL outperforms other advanced active learning competitors. Besides, when using only 20%, 20%, and 15% of labeled samples in these datasets, MDAL reaches 99.6%, 99.9%, and 99.3% of the performance of supervised training with full labeled dataset, respectively. The results show that our proposed MDAL could significantly reduce the annotation cost for multimodal medical image analysis. We expect MDAL could be further extended to other multimodal medical data for lower annotation costs.

Authors

  • Haoran Wang
    Department of Urology, The Fifth Affiliated Hospital of Guangzhou Medical University, Guangzhou, 510700, China.
  • Qiuye Jin
    Computational Bioscience Research Center (CBRC), King Abdullah University of Science and Technology (KAUST), Thuwal 23955, Saudi Arabia.
  • Xiaofei Du
  • Liu Wang
    CAS Key Laboratory of Mechanical Behavior and Design of Materials, Department of Modern Mechanics, University of Science and Technology of China, Hefei, Anhui, China. liuwang@mit.edu.
  • Qinhao Guo
    Department of Gynecologic Oncology, Fudan University Shanghai Cancer Center, Fudan University, Shanghai, China; Department of Oncology, Shanghai Medical College, Fudan University, Shanghai, China.
  • Haiming Li
    Department of Radiology, Fudan University Shanghai Cancer Center, 270 Dongan Road, Shanghai, 200032, People's Republic of China.
  • Manning Wang
    Digital Medical Research Center, Fudan University, Shanghai, China.
  • Zhijian Song
    Digital Medical Research Center, Fudan University, Shanghai, China.