Artificial intelligence-based digital pathology using H&E-stained whole slide images in immuno-oncology: from immune biomarker detection to immunotherapy response prediction.

Journal: Journal for immunotherapy of cancer
Published Date:

Abstract

Immuno-oncology and the advent of immunotherapies, in particular immune checkpoint inhibitors (ICIs), have fundamentally altered the way we treat cancer. Yet only a small subset of patients actually responds to ICIs, and many face significant adverse effects, making the accurate selection of patients for ICIs essential to the work of immuno-oncology. Immune biomarkers, such as programmed death-ligand 1, microsatellite instability/defective mismatch repair, and tumor mutational burden have been developed for patient selection and stratification for ICIs, though their predictive abilities remain limited. This is due to several challenges: lack of adequate tissue sampling, the time-consuming and subjective nature of manual visual-based quantification techniques, and the growing recognition of the complexity of the tumor microenvironment, for which these tests cannot fully capture on their own. Meanwhile, emerging technologies in the field of artificial intelligence (AI), such as the performance of deep learning techniques in digital pathology, have garnered significant attention for their potential to be used in this space. Many have now turned their attention towards the immuno-oncology-related applications for digital pathology, particularly in analyzing whole-slide images of widely available H&E-stained slides to aid in immune biomarker detection and ICI response prediction. In this review, we discuss the current landscape of AI-based digital pathology in immuno-oncology, including its applications for identifying and measuring immune biomarkers and, importantly, its potential for predicting ICI response and survival outcomes. We will end by discussing the challenges and future directions of adopting AI technologies for clinical deployment.

Authors

  • Jessica Zhang
  • Horyun Choi
    Department of Medicine, University of Hawaii, Honolulu, Hawaii, USA.
  • Yeseul Kim
    School of Chemical Engineering, Yeungnam University, Gyeongsan 38541, Republic of Korea.
  • Jonghanne Park
    The Jackson Laboratory for Genomic Medicine, 10 Discovery Dr., Farmington, CT, 06032, USA.
  • Sukjoo Cho
    Department of Pediatrics, University of South Florida Morsani College of Medicine, Tampa, FL, USA.
  • Eugene Kim
    Department of Biological Science, University of Calgary, Calgary, AB, Canada.
  • Allen Cho
    Internal Medicine, Louis A Weiss Memorial Hospital, Chicago, Illinois, USA.
  • Ju Young Lee
    DEEPNOID Inc., Seoul, Korea.
  • Jaeyoun Choi
    Department of Medicine, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
  • Christmann Low
    Department of Medicine, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
  • Chan Mi Jung
    Department of Medicine, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
  • Emma J Yu
    Department of Medicine, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
  • Jeffrey H Chuang
    The Jackson Laboratory for Genomic Medicine, Farmington, CT, USA. Jeff.Chuang@jax.org.
  • Lee Cooper
    Department of Pathology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
  • Young Kwang Chae
    Department of Hematology and Oncology, Department of Medicine, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.