Deep Learning for EEG Seizure Detection in Preterm Infants.

Journal: International journal of neural systems
Published Date:

Abstract

EEG is the gold standard for seizure detection in the newborn infant, but EEG interpretation in the preterm group is particularly challenging; trained experts are scarce and the task of interpreting EEG in real-time is arduous. Preterm infants are reported to have a higher incidence of seizures compared to term infants. Preterm EEG morphology differs from that of term infants, which implies that seizure detection algorithms trained on term EEG may not be appropriate. The task of developing preterm specific algorithms becomes extra-challenging given the limited amount of annotated preterm EEG data available. This paper explores novel deep learning (DL) architectures for the task of neonatal seizure detection in preterm infants. The study tests and compares several approaches to address the problem: training on data from full-term infants; training on data from preterm infants; training on age-specific preterm data and transfer learning. The system performance is assessed on a large database of continuous EEG recordings of 575[Formula: see text]h in duration. It is shown that the accuracy of a validated term-trained EEG seizure detection algorithm, based on a support vector machine classifier, when tested on preterm infants falls well short of the performance achieved for full-term infants. An AUC of 88.3% was obtained when tested on preterm EEG as compared to 96.6% obtained when tested on term EEG. When re-trained on preterm EEG, the performance marginally increases to 89.7%. An alternative DL approach shows a more stable trend when tested on the preterm cohort, starting with an AUC of 93.3% for the term-trained algorithm and reaching 95.0% by transfer learning from the term model using available preterm data. The proposed DL approach avoids time-consuming explicit feature engineering and leverages the existence of the term seizure detection model, resulting in accurate predictions with a minimum amount of annotated preterm data.

Authors

  • Alison O'Shea
    Department of Electrical and Electronic Engineering, University College Cork, College Rd, Cork, Ireland; INFANT Research Centre, Cork University Hospital, Cork, Ireland. Electronic address: alisonoshea@umail.ucc.ie.
  • Rehan Ahmed
    Neonatal Brain Research Group, Irish Centre for Fetal and Neonatal Translational Research (INFANT), Ireland; Department of Electrical and Electronics Engineering, University College Cork, Ireland. Electronic address: rehan@eleceng.ucc.ie.
  • Gordon Lightbody
    Neonatal Brain Research Group, Irish Centre for Fetal and Neonatal Translational Research (INFANT), Ireland; Department of Electrical and Electronics Engineering, University College Cork, Ireland.
  • Elena Pavlidis
    INFANT Research Centre, University College Cork, Cork, Ireland; Department of Paediatrics and Child Health, University College Cork, Cork, Ireland.
  • Rhodri Lloyd
    Irish Centre for Maternal and Child Health Research (INFANT), University College Cork, Cork, Ireland.
  • Francesco Pisani
    Child Neuropsychiatric Unit, Medicine and Surgery Department, University of Parma, Italy.
  • Willian Marnane
    Irish Centre for Maternal and Child Health Research (INFANT), Department of Electrical and Electronic Engineering, University College Cork, Cork, Ireland.
  • Sean Mathieson
    Irish Centre for Maternal and Child Health Research (INFANT), Department of Pediatrics and Child Health, University College Cork, Cork, Ireland.
  • Geraldine Boylan
    Neonatal Brain Research Group, Irish Centre for Fetal and Neonatal Translational Research (INFANT), Ireland; Department of Pediatrics and Child Health, University College Cork, Ireland.
  • Andriy Temko
    Neonatal Brain Research Group, Irish Centre for Fetal and Neonatal Translational Research (INFANT), Ireland; Department of Electrical and Electronics Engineering, University College Cork, Ireland.