Deep learning-based grading of ductal carcinoma in situ in breast histopathology images.

Journal: Laboratory investigation; a journal of technical methods and pathology
Published Date:

Abstract

Ductal carcinoma in situ (DCIS) is a non-invasive breast cancer that can progress into invasive ductal carcinoma (IDC). Studies suggest DCIS is often overtreated since a considerable part of DCIS lesions may never progress into IDC. Lower grade lesions have a lower progression speed and risk, possibly allowing treatment de-escalation. However, studies show significant inter-observer variation in DCIS grading. Automated image analysis may provide an objective solution to address high subjectivity of DCIS grading by pathologists. In this study, we developed and evaluated a deep learning-based DCIS grading system. The system was developed using the consensus DCIS grade of three expert observers on a dataset of 1186 DCIS lesions from 59 patients. The inter-observer agreement, measured by quadratic weighted Cohen's kappa, was used to evaluate the system and compare its performance to that of expert observers. We present an analysis of the lesion-level and patient-level inter-observer agreement on an independent test set of 1001 lesions from 50 patients. The deep learning system (dl) achieved on average slightly higher inter-observer agreement to the three observers (o1, o2 and o3) (κ= 0.81, κ= 0.53 and κ= 0.40) than the observers amongst each other (κ= 0.58, κ= 0.50 and κ= 0.42) at the lesion-level. At the patient-level, the deep learning system achieved similar agreement to the observers (κ= 0.77, κ= 0.75 and κ= 0.70) as the observers amongst each other (κ= 0.77, κ= 0.75 and κ= 0.72). The deep learning system better reflected the grading spectrum of DCIS than two of the observers. In conclusion, we developed a deep learning-based DCIS grading system that achieved a performance similar to expert observers. To the best of our knowledge, this is the first automated system for the grading of DCIS that could assist pathologists by providing robust and reproducible second opinions on DCIS grade.

Authors

  • Suzanne C Wetstein
    Medical Image Analysis Group, Department of Biomedical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands.
  • Nikolas Stathonikos
    Department of Pathology, University Medical Center Utrecht, Utrecht, the Netherlands.
  • Josien P W Pluim
    Medical Image Analysis, Department of Biomedical Engineering, Eindhoven University of Technology, The Netherlands.
  • Yujing J Heng
    Department of Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA.
  • Natalie D Ter Hoeve
    Department of Pathology, University Medical Center Utrecht, University Utrecht, Utrecht, The Netherlands.
  • Celien P H Vreuls
    Department of Pathology, University Medical Center Utrecht, University Utrecht, Utrecht, The Netherlands.
  • Paul J van Diest
    Department of Pathology, University Medical Center Utrecht, Utrecht, the Netherlands.
  • Mitko Veta
    Medical Image Analysis Group, Eindhoven University of Technology, Eindhoven, the Netherlands.