Predicting cell invasion in breast tumor microenvironment from radiological imaging phenotypes.

Journal: BMC cancer
Published Date:

Abstract

BACKGROUND: The abundance of immune and stromal cells in the tumor microenvironment (TME) is informative of levels of inflammation, angiogenesis, and desmoplasia. Radiomics, an approach of extracting quantitative features from radiological imaging to characterize diseases, have been shown to predict molecular classification, cancer recurrence risk, and many other disease outcomes. However, the ability of radiomics methods to predict the abundance of various cell types in the TME remains unclear. In this study, we employed a radio-genomics approach and machine learning models to predict the infiltration of 10 cell types in breast cancer lesions utilizing radiomic features extracted from breast Dynamic Contrast Enhanced Magnetic Resonance Imaging.

Authors

  • Dooman Arefan
    Department of Radiology, University of Pittsburgh, Pittsburgh, PA, United States.
  • Ryan M Hausler
    Department of Biomedical Informatics, University of Pittsburgh School of Medicine, 5607 Baum Blvd, Pittsburgh, PA, 15206, USA.
  • Jules H Sumkin
    Department of Radiology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania.
  • Min Sun
    Division of Oncology, University of Pittsburgh Medical Center Hillman Cancer Center at St. Margaret, 200 Delafield Rd, Pittsburgh, PA, 15215, USA.
  • Shandong Wu
    Intelligent Systems Program, University of Pittsburgh, Pittsburgh, PA, United States.