Wet-dry-wet drug screen leads to the synthesis of TS1, a novel compound reversing lung fibrosis through inhibition of myofibroblast differentiation.

Journal: Cell death & disease
PMID:

Abstract

Therapies halting the progression of fibrosis are ineffective and limited. Activated myofibroblasts are emerging as important targets in the progression of fibrotic diseases. Previously, we performed a high-throughput screen on lung fibroblasts and subsequently demonstrated that the inhibition of myofibroblast activation is able to prevent lung fibrosis in bleomycin-treated mice. High-throughput screens are an ideal method of repurposing drugs, yet they contain an intrinsic limitation, which is the size of the library itself. Here, we exploited the data from our "wet" screen and used "dry" machine learning analysis to virtually screen millions of compounds, identifying novel anti-fibrotic hits which target myofibroblast differentiation, many of which were structurally related to dopamine. We synthesized and validated several compounds ex vivo ("wet") and confirmed that both dopamine and its derivative TS1 are powerful inhibitors of myofibroblast activation. We further used RNAi-mediated knock-down and demonstrated that both molecules act through the dopamine receptor 3 and exert their anti-fibrotic effect by inhibiting the canonical transforming growth factor β pathway. Furthermore, molecular modelling confirmed the capability of TS1 to bind both human and mouse dopamine receptor 3. The anti-fibrotic effect on human cells was confirmed using primary fibroblasts from idiopathic pulmonary fibrosis patients. Finally, TS1 prevented and reversed disease progression in a murine model of lung fibrosis. Both our interdisciplinary approach and our novel compound TS1 are promising tools for understanding and combating lung fibrosis.

Authors

  • Nadja Anneliese Ruth Ring
    Cardiovascular Biology Laboratory, International Centre for Genetic Engineering and Biotechnology (ICGEB), Trieste, Italy.
  • Maria Concetta Volpe
    Cardiovascular Biology Laboratory, International Centre for Genetic Engineering and Biotechnology (ICGEB), Trieste, Italy.
  • Tomaž Stepišnik
    Department of Knowledge Technologies, Jožef Stefan Institute, Ljubljana, Slovenia; Jožef Stefan International Postgraduate School, Ljubljana, Slovenia. Electronic address: tomaz.stepisnik@ijs.si.
  • Maria Grazia Mamolo
    Department of Chemical and Pharmaceutical Sciences, University of Trieste, Trieste, Italy.
  • Panče Panov
    Jožef Stefan Institute, Ljubljana, Slovenia; Jožef Stefan International Postgraduate School, Ljubljana, Slovenia.
  • Dragi Kocev
    Department of Knowledge Technologies, Jožef Stefan Institute, Ljubljana, Slovenia. Electronic address: Dragi.Kocev@ijs.si.
  • Simone Vodret
    Cardiovascular Biology Laboratory, International Centre for Genetic Engineering and Biotechnology (ICGEB), Trieste, Italy.
  • Sara Fortuna
    Department of Chemical and Pharmaceutical Sciences, University of Trieste, Trieste, Italy.
  • Antonella Calabretti
    Department of Chemical and Pharmaceutical Sciences, University of Trieste, Trieste, Italy.
  • Michael Rehman
    Cardiovascular Biology Laboratory, International Centre for Genetic Engineering and Biotechnology (ICGEB), Trieste, Italy.
  • Andrea Colliva
    Cardiovascular Biology Laboratory, International Centre for Genetic Engineering and Biotechnology (ICGEB), Trieste, Italy.
  • Pietro Marchesan
    Cardiovascular Biology Laboratory, International Centre for Genetic Engineering and Biotechnology (ICGEB), Trieste, Italy.
  • Luca Camparini
    Molecular Cardiology Unit, International Centre for Genetic Engineering and Biotechnology (ICGEB), Trieste, Italy.
  • Thomas Marcuzzo
    Department of Medical, Surgical and Health Sciences, University of Trieste, Trieste, Italy.
  • Rossana Bussani
    Department of Medical, Surgical and Health Sciences, University of Trieste, Trieste, Italy.
  • Sara Scarabellotto
    Department of Chemical and Pharmaceutical Sciences, University of Trieste, Trieste, Italy.
  • Marco Confalonieri
    Department of Medical, Surgical and Health Sciences, University of Trieste, Trieste, Italy.
  • Tho X Pham
    Arthritis Center, Department of Medicine, Boston University School of Medicine, Boston, MA, USA.
  • Giovanni Ligresti
    Arthritis Center, Department of Medicine, Boston University School of Medicine, Boston, MA, USA.
  • Nunzia Caporarello
    Department of Physiology and Biomedical Engineering, Mayo Clinic, Rochester, MN, USA.
  • Francesco S Loffredo
    Molecular Cardiology Unit, International Centre for Genetic Engineering and Biotechnology (ICGEB), Trieste, Italy.
  • Daniele Zampieri
    Department of Chemical and Pharmaceutical Sciences, University of Trieste, Trieste, Italy.
  • Sašo Džeroski
    Dept. of Knowledge Technologies, Jožef Stefan Institute, Jamova 39, 1000 Ljubljana, Slovenia.
  • Serena Zacchigna
    Cardiovascular Biology Laboratory, International Centre for Genetic Engineering and Biotechnology (ICGEB), Trieste, Italy. Serena.Zacchigna@icgeb.org.