COPD stage detection: leveraging the auto-metric graph neural network with inspiratory and expiratory chest CT images.

Journal: Medical & biological engineering & computing
PMID:

Abstract

Chronic obstructive pulmonary disease (COPD) is a common lung disease that can lead to restricted airflow and respiratory problems, causing a significant health, economic, and social burden. Detecting the COPD stage can provide a timely warning for prompt intervention in COPD patients. However, existing methods based on inspiratory (IN) and expiratory (EX) chest CT images are not sufficiently accurate and efficient in COPD stage detection. The lung region images are autonomously segmented from IN and EX chest CT images to extract the lung radiomics and 3D CNN features. Furthermore, a strategy for concatenating and selecting features was employed in COPD stage detection based on radiomics and 3D CNN features. Finally, we combine all the radiomics, 3D CNN features, and factor risks (age, gender, and smoking history) to detect the COPD stage based on the Auto-Metric Graph Neural Network (AMGNN). The AMGNN with radiomics and 3D CNN features achieves the best performance at 89.7 of accuracy, 90.9 of precision, 89.5 of F1-score, and 95.8 of AUC compared to six classic machine learning (ML) classifiers. Our proposed approach demonstrates high accuracy in detecting the stage of COPD using both IN and EX chest CT images. This method can potentially establish an efficient diagnostic tool for patients with COPD. Additionally, we have identified radiomics and 3D CNN as more appropriate biomarkers than Parametric Response Mapping (PRM). Moreover, our findings indicate that expiration yields better results than inspiration in detecting the stage of COPD.

Authors

  • Xingguang Deng
    College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, 110169, China.
  • Wei Li
    Department of Nephrology, The Second Affiliated Hospital of Guangxi Medical University, Nanning, Guangxi, China.
  • Yingjian Yang
    School of Medicine and Biological Information Engineering, Northeastern University, Shenyang, China.
  • Shicong Wang
    College of Health Science and Environmental Engineering, Shenzhen Technology University, Shenzhen, 518118, China.
  • Nanrong Zeng
    School of Applied Technology, Shenzhen University, Shenzhen, China.
  • Jiaxuan Xu
    Faculty of Engineering and Applied Science, University of Regina, Regina, SK, S4S 0A2, Canada.
  • Haseeb Hassan
    College of Big Data and Internet, Shenzhen Technology University, Shenzhen, China; Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Shenzhen University Health Science Center, Shenzhen, China.
  • Ziran Chen
    College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, China.
  • Yang Liu
    Department of Computer Science, Hong Kong Baptist University, Hong Kong, China.
  • Xiaoqiang Miao
    College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, 110169, China.
  • Yingwei Guo
    School of Electrical and Information Engineering, Northeast Petroleum University, Daqing, China.
  • Rongchang Chen
    Key Laboratory of Respiratory Disease of Shenzhen, Shenzhen Institute of Respiratory Disease, Shenzhen People's Hospital (Second Affiliated Hospital of Jinan University, First Affiliated Hospital of South University of Science and Technology of China), Shenzhen, China. Electronic address: chenrc@vip.163.com.
  • Yan Kang
    Sino-Dutch Biomedical and Information Engineering School, Northeastern University, Shenyang, Liaoning, People's Republic of China.