Improving the classification of multiple sclerosis and cerebral small vessel disease with interpretable transfer attention neural network.

Journal: Computers in biology and medicine
PMID:

Abstract

As an autoimmune-mediated inflammatory demyelinating disease of the central nervous system, multiple sclerosis (MS) is often confused with cerebral small vessel disease (cSVD), which is a regional pathological change in brain tissue with unknown pathogenesis. This is due to their similar clinical presentations and imaging manifestations. That misdiagnosis can significantly increase the occurrence of adverse events. Delayed or incorrect treatment is one of the most important causes of MS progression. Therefore, the development of a practical diagnostic imaging aid could significantly reduce the risk of misdiagnosis and improve patient prognosis. We propose an interpretable deep learning (DL) model that differentiates MS and cSVD using T2-weighted fluid-attenuated inversion recovery (FLAIR) images. Transfer learning (TL) was utilized to extract features from the ImageNet dataset. This pioneering model marks the first of its kind in neuroimaging, showing great potential in enhancing differential diagnostic capabilities within the field of neurological disorders. Our model extracts the texture features of the images and achieves more robust feature learning through two attention modules. The attention maps provided by the attention modules provide model interpretation to validate model learning and reveal more information to physicians. Finally, the proposed model is trained end-to-end using focal loss to reduce the influence of class imbalance. The model was validated using clinically diagnosed MS (n=112) and cSVD (n=321) patients from the Beijing Tiantan Hospital. The performance of the proposed model was better than that of two commonly used DL approaches, with a mean balanced accuracy of 86.06 % and a mean area under the receiver operating characteristic curve of 98.78 %. Moreover, the generated attention heat maps showed that the proposed model could focus on the lesion signatures in the image. The proposed model provides a practical diagnostic imaging aid for the use of routinely available imaging techniques such as magnetic resonance imaging to classify MS and cSVD by linking DL to human brain disease. We anticipate a substantial improvement in accurately distinguishing between various neurological conditions through this novel model.

Authors

  • Wangshu Xu
    Department of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing, 100070, China; China National Clinical Research Center for Neurological Diseases, Beijing, 100070, China.
  • Zhiwei Rong
    Department of Epidemiology and Biostatistics, School of Public Health, Harbin Medical University, Harbin 150086, China.
  • Wenping Ma
    Department of Neurosurgery, Beijing Children's Hospital, Capital Medical University, National Center for Children's Health, Beijing, 100045, China.
  • Bin Zhu
    Department of Pharmacy, Beijing Tiantan Hospital, Capital Medical University, Beijing, China.
  • Na Li
    School of Nursing, Fujian University of Traditional Chinese Medicine, Fuzhou, China.
  • Jiansong Huang
    Peking University Health Science Center, Beijing, 100191, China.
  • Zhilin Liu
    Department of Biostatistics Beijing, Peking University School of Public Health, No. 38 Xueyuan Road, Haidian District, Beijing, 100000, China.
  • Yipei Yu
    Department of Biostatistics, School of Public Health, Peking University, Beijing, 100191, China.
  • Fa Zhang
    High Performance Computer Research Center, Institute of Computing Technology, Chinese Academy of Sciences, Beijing, China.
  • Xinghu Zhang
    Department of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing 100070, China.
  • Ming Ge
    College of Veterinary Medicine, Northeast Agricultural University, Harbin 150030, China; Key Laboratory of the Provincial Education, Department of Heilongjiang for Common Animal Disease Prevention and Treatment, Northeast Agricultural University, Harbin 150030, China. Electronic address: geming@neau.edu.cn.
  • Yan Hou
    Department of Biostatistics Beijing, Peking University School of Public Health, No. 38 Xueyuan Road, Haidian District, Beijing, 100000, China; Peking University Clinical Research Center, No. 38 Xueyuan Road, Haidian District, Beijing, 100000, China. Electronic address: houyan@bjmu.edu.cn.