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RxNorm

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Toward a normalized clinical drug knowledge base in China-applying the RxNorm model to Chinese clinical drugs.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: In recent years, electronic health record systems have been widely implemented in China, making clinical data available electronically. However, little effort has been devoted to making drug information exchangeable among these systems. Th...

AllergyMap: An Open Source Corpus of Allergy Mention Normalizations.

AMIA ... Annual Symposium proceedings. AMIA Symposium
Allergy mention normalization is challenging because of the wide range of possible allergens including medications, foods, plants, animals, and consumer products. This paper describes the process of mapping free-text allergy information from an elect...

iDISK: the integrated DIetary Supplements Knowledge base.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: To build a knowledge base of dietary supplement (DS) information, called the integrated DIetary Supplement Knowledge base (iDISK), which integrates and standardizes DS-related information from 4 existing resources.

Unified Medical Language System resources improve sieve-based generation and Bidirectional Encoder Representations from Transformers (BERT)-based ranking for concept normalization.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: Concept normalization, the task of linking phrases in text to concepts in an ontology, is useful for many downstream tasks including relation extraction, information retrieval, etc. We present a generate-and-rank concept normalization syst...

Automated Modeling of Clinical Narrative with High Definition Natural Language Processing Using Solor and Analysis Normal Form.

Studies in health technology and informatics
OBJECTIVE: One important concept in informatics is data which meets the principles of Findability, Accessibility, Interoperability and Reusability (FAIR). Standards, such as terminologies (findability), assist with important tasks like interoperabili...

Toward a unified understanding of drug-drug interactions: mapping Japanese drug codes to RxNorm concepts.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVES: Linking information on Japanese pharmaceutical products to global knowledge bases (KBs) would enhance international collaborative research and yield valuable insights. However, public access to mappings of Japanese pharmaceutical products...