AIMC Topic: Sequence Homology, Amino Acid

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ComplexContact: a web server for inter-protein contact prediction using deep learning.

Nucleic acids research Jul 2, 2018
ComplexContact (http://raptorx2.uchicago.edu/ComplexContact/) is a web server for sequence-based interfacial residue-residue contact prediction of a putative protein complex. Interfacial residue-residue contacts are critical for understanding how pro...
Humans Software Databases, Factual Deep Learning Computational Biology Escherichia coli Proteins Internet Amino Acid Sequence Protein Structure, Secondary Sequence Alignment Sequence Homology, Amino Acid Protein Interaction Domains and Motifs Structural Homology, Protein
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Machine Learning-Based Modeling of Drug Toxicity.

Methods in molecular biology (Clifton, N.J.) Jan 1, 2018
Toxicity is an important reason for the failure of drug research and development (R&D). The traditional experimental testings for chemical toxicity profile are costly and time-consuming. Therefore, it is attractive to develop the effective and accura...
Humans Machine Learning Software Drug Design Carcinogenesis Molecular Structure Internet Pharmaceutical Preparations Models, Biological Drug-Related Side Effects and Adverse Reactions Ligands Quantitative Structure-Activity Relationship Sequence Homology, Amino Acid Ether-A-Go-Go Potassium Channels
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ProtDec-LTR2.0: an improved method for protein remote homology detection by combining pseudo protein and supervised Learning to Rank.

Bioinformatics (Oxford, England) Nov 1, 2017
SUMMARY: As one of the most important tasks in protein sequence analysis, protein remote homology detection is critical for both basic research and practical applications. Here, we present an effective web server for protein remote homology detection...
Software Algorithms User-Computer Interface Computational Biology Proteins Supervised Machine Learning Sequence Alignment Sequence Homology, Amino Acid Sequence Analysis, Protein
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