Prognosis of p16 and Human Papillomavirus Discordant Oropharyngeal Cancers and the Exploration of Using Natural Language Processing to Analyze Free-Text Pathology Reports.

Journal: JCO clinical cancer informatics
PMID:

Abstract

PURPOSE: Treatment deintensification for human papillomavirus-positive (HPV+)-associated oropharyngeal cancer (OPC) has been the catalyst of experts worldwide. In situ hybridization is optimal to identify HPV+ OPC, but immunohistochemistry for its surrogate p16INK4a (p16) is standard-of-care given its availability and sensitivity. HPV testing is not required for clinical management, so treatments are often administered on the basis of p16 status alone. However, the prognosis of p16/HPV discordant tumors is uncertain.

Authors

  • Ethan Shin
    Geneva School, New York, NY.
  • Justin Choi
    SUNY Downstate College of Medicine, Brooklyn, NY.
  • Tony K W Hung
    Memorial Sloan Kettering Cancer Center, New York, NY.
  • Chester Poon
    Memorial Sloan Kettering Cancer Center, New York, NY.
  • Nadeem Riaz
    Department of Radiation Oncology, Memorial Sloan Kettering Cancer Center, New York, NY.
  • Yao Yu
    AbbVie Inc, North Chicago, IL, USA.
  • Jung Julie Kang
    Department of Therapeutic Radiology, Yale University, New Haven, CT.