Automated extraction of functional biomarkers of verbal and ambulatory ability from multi-institutional clinical notes using large language models.

Journal: Journal of neurodevelopmental disorders
PMID:

Abstract

BACKGROUND: Functional biomarkers in neurodevelopmental disorders, such as verbal and ambulatory abilities, are essential for clinical care and research activities. Treatment planning, intervention monitoring, and identifying comorbid conditions in individuals with intellectual and developmental disabilities (IDDs) rely on standardized assessments of these abilities. However, traditional assessments impose a burden on patients and providers, often leading to longitudinal inconsistencies and inequities due to evolving guidelines and associated time-cost. Therefore, this study aimed to develop an automated approach to classify verbal and ambulatory abilities from EHR data of IDD and cerebral palsy (CP) patients. Application of large language models (LLMs) to clinical notes, which are rich in longitudinal data, may provide a low-burden pipeline for extracting functional biomarkers efficiently and accurately.

Authors

  • Levi Kaster
    Institute for Informatics, Data Science and Biostatistics, Washington University School of Medicine in St. Louis, St. Louis, MO, USA.
  • Ethan Hillis
    Institute for Informatics, Data Science and Biostatistics, Washington University School of Medicine in St. Louis, St. Louis, MO, USA.
  • Inez Y Oh
    Institute for Informatics, Data Science and Biostatistics, Washington University School of Medicine in St. Louis, St. Louis, MO, USA.
  • Bhooma R Aravamuthan
    Department of Neurology, Washington University School of Medicine in St. Louis, St. Louis, MO, USA.
  • Virginia C Lanzotti
    Department of Psychiatry, Washington University School of Medicine in St. Louis, St. Louis, MO, USA.
  • Casey R Vickstrom
    Department of Neurology, Washington University School of Medicine in St. Louis, St. Louis, MO, USA.
  • Christina A Gurnett
    Department of Neurology, Washington University School of Medicine in St. Louis, St. Louis, MO, USA.
  • Philip R O Payne
    Institute for Informatics, Data Science and Biostatistics, Washington University School of Medicine in St. Louis, St. Louis, MO, USA.
  • Aditi Gupta
    Institute for Informatics, Data Science and Biostatistics, Washington University School of Medicine in St. Louis, St. Louis, MO, USA. agupta24@wustl.edu.