Personalized azithromycin treatment rules for children with watery diarrhea using machine learning.

Journal: Nature communications
Published Date:

Abstract

We use machine learning to identify innovative strategies to target azithromycin to the children with watery diarrhea who are most likely to benefit. Using data from a randomized trial of azithromycin for watery diarrhea (NCT03130114), we develop personalized treatment rules given sets of diagnostic, child, and clinical characteristics, employing a robust ensemble machine learning-based procedure. This procedure estimates the child-level expected benefit for a given set of covariates by combining predictions from a library of statistical models. For each rule, we estimate the proportion treated under the rule and the average benefits of treatment. Among 6692 children, treatment under the most comprehensive rule is recommended on average for one third of children. The risk of diarrhea on day 3 is 10.1% lower (95% CI: 5.4, 14.9) with azithromycin compared to placebo among children recommended for treatment (NNT: 10). For day 90 re-hospitalization and death, risk is 2.4% lower (95% CI: 0.6, 4.1; NNT: 42). While pathogen diagnostics are strong determinants of azithromycin effects on diarrhea duration, host characteristics may better predict benefits for re-hospitalization or death. This suggests that targeting antibiotic treatment for severe outcomes among children with watery diarrhea may be possible without access to pathogen diagnostics.

Authors

  • Sara S Kim
    Department of Epidemiology, Rollins School of Public Health, Emory University, Atlanta, GA, USA. sara.kim2@emory.edu.
  • Allison Codi
    Department of Biostatistics, Rollins School of Public Health, Emory University, Atlanta, GA, USA.
  • James A Platts-Mills
    University of Virginia, Charlottesville, Virginia, USA.
  • Patricia B Pavlinac
    Department of Global Health, University of Washington, Seattle, USA.
  • Karim Manji
    Zivot Limb Preservation Centre, Peter Lougheed Centre, Calgary, Canada.
  • Christopher R Sudfeld
    Department of Global Health and Population, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
  • Christopher P Duggan
    Department of Global Health and Population, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
  • Queen Dube
    Department of Pediatrics, Queen Elizabeth Central Hospital, Blantyre, Malawi.
  • Naor Bar-Zeev
    International Vaccine Access Center, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA.
  • Karen Kotloff
    Department of Pediatrics, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, MD, USA.
  • Samba O Sow
    Centre pour le Développement des Vaccins, Bamako, Mali.
  • Sunil Sazawal
    Center for Public Health Kinetics, Global Division, 214 A, LGL Vinoba Puri, Lajpat Nagar II, New Delhi, India. ssazawal@jhu.edu.
  • Benson O Singa
    Childhood Acute Illness and Nutrition Network, Nairobi, Kenya.
  • Judd Walson
    Childhood Acute Illness and Nutrition Network, Nairobi, Kenya.
  • Farah Qamar
    Department of Pediatrics and Child Heath, Aga Khan University, Karachi, Pakistan.
  • Tahmeed Ahmed
    Nutrition and Clinical Services Division, International Center for Diarrheal Disease and Research, Bangladesh (icddr,b), Dhaka, Bangladesh.
  • Ayesha De Costa
    Department of Maternal, Child, and Adolescent Health and Aging, World Health Organization, Geneva, Switzerland.
  • David Benkeser
    Group in Biostatistics, University of California, Berkeley, Berkeley 101 Haviland HallCA, U.S.A.
  • Elizabeth T Rogawski McQuade
    Department of Epidemiology, Rollins School of Public Health, Emory University, Atlanta, GA, USA.