Age estimation using bloodstain miRNAs based on massive parallel sequencing and machine learning: A pilot study.

Journal: Forensic science international. Genetics
PMID:

Abstract

Age estimation is one of the most important components in the practice of forensic science, especially for body fluids or stains at crime scenes. Recent studies have focused on the application of DNA methylation for chronological age determination in the field of forensic genetics. However, the amount of DNA and the complex bisulfite conversion process make applying this method in trace or degraded samples difficult. MicroRNAs (miRNAs), a group of small noncoding RNAs, have great potential in forensic science due to their antidegradation property and tissue specificity. Certain miRNAs are highly age-related and may have potential utility in age prediction. In this study, the expression profile of miRNAs from blood samples was explored using massive parallel sequencing; age-related miRNAs were subsequently selected for age prediction. We then established age prediction models for bloodstains based on six age-related miRNAs using seven machine learning models. Results revealed that the mean absolute error (MAE) was 5.52 and 7.46 years in male and female bloodstain samples, respectively, using the AdaBoost algorithm. This pilot study demonstrates the possibility of performing forensic age prediction using miRNAs and may provide useful information in future case investigations.

Authors

  • Chen Fang
    State Key Laboratory of Stem Cell and Reproductive Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing, 100101, China.
  • Xu Liu
    School of Electrical and Electronic Engineering, Nanyang Technological University, Singapore 639798, Singapore. liuxu16@bjut.edu.cn.
  • Jing Zhao
    Department of Pharmacy, Pharmacoepidemiology and Drug Safety Research Group, Faculty of Mathematics and Natural Sciences, University of Oslo, Oslo, Norway.
  • Bingbing Xie
    State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-Sen University, Guangzhou 510060, PR China.
  • Jialin Qian
    Beijing Center for Physical and Chemical Analysis, Beijing 100094, PR China; Beijing Engineering Technology Research Centre of Gene Sequencing and Gene Function Analysis, Beijing 100094, PR China.
  • Wenli Liu
    Beijing Center for Physical and Chemical Analysis, Beijing 100094, PR China; Beijing Engineering Technology Research Centre of Gene Sequencing and Gene Function Analysis, Beijing 100094, PR China.
  • Baoming Li
    Beijing Center for Physical and Chemical Analysis, Beijing 100094, PR China; Beijing Engineering Technology Research Centre of Gene Sequencing and Gene Function Analysis, Beijing 100094, PR China.
  • Xiaoli Zhang
    School of Life Sciences, Zhengzhou University Zhengzhou 450001 Henan China pingaw@126.com.
  • Huijuan Wu
    Beijing Laboratory Animal Research Center, Beijing 100012, PR China. Electronic address: sunnywhj@126.com.
  • Jiangwei Yan
    Shanxi Medical University, Taiyuan 030001, PR China. Electronic address: yanjw@sxmu.edu.cn.