Artificial intelligence based automatic quantification of epicardial adipose tissue suitable for large scale population studies.

Journal: Scientific reports
Published Date:

Abstract

To develop a fully automatic model capable of reliably quantifying epicardial adipose tissue (EAT) volumes and attenuation in large scale population studies to investigate their relation to markers of cardiometabolic risk. Non-contrast cardiac CT images from the SCAPIS study were used to train and test a convolutional neural network based model to quantify EAT by: segmenting the pericardium, suppressing noise-induced artifacts in the heart chambers, and, if image sets were incomplete, imputing missing EAT volumes. The model achieved a mean Dice coefficient of 0.90 when tested against expert manual segmentations on 25 image sets. Tested on 1400 image sets, the model successfully segmented 99.4% of the cases. Automatic imputation of missing EAT volumes had an error of less than 3.1% with up to 20% of the slices in image sets missing. The most important predictors of EAT volumes were weight and waist, while EAT attenuation was predicted mainly by EAT volume. A model with excellent performance, capable of fully automatic handling of the most common challenges in large scale EAT quantification has been developed. In studies of the importance of EAT in disease development, the strong co-variation with anthropometric measures needs to be carefully considered.

Authors

  • David Molnar
    Department of Molecular and Clinical Medicine, Institute of Medicine, Sahlgrenska Academy, University of Gothenburg, Box 428, 40530, Gothenburg, Sweden.
  • Olof Enqvist
    Department of Electrical Engineering, Region Västra Götaland, Chalmers University of Technology, Gothenburg, Sweden.
  • Johannes Ulén
    Eigenvision AB, Malmö, Sweden.
  • Måns Larsson
    Department of Electrical Engineering, Chalmers University of Technology, Gothenburg, Sweden.
  • John Brandberg
    Department of Radiology, Sahlgrenska University Hospital, Region Västra Götaland, Gothenburg, Sweden.
  • Åse A Johnsson
    Department of Radiology, Institute of Clinical Sciences, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.
  • Elias Björnson
    Department of Molecular and Clinical Medicine, Institute of Medicine, Sahlgrenska Academy, University of Gothenburg, Box 428, 40530, Gothenburg, Sweden.
  • Göran Bergström
    Department of Molecular and Clinical Medicine, Institute of Medicine, Sahlgrenska Academy, University of Gothenburg, Box 428, 40530, Gothenburg, Sweden. goran.bergstrom@hjl.gu.se.
  • Ola Hjelmgren
    Department of Molecular and Clinical Medicine, Institute of Medicine, Sahlgrenska Academy, University of Gothenburg, Box 428, 40530, Gothenburg, Sweden.