AIMC Topic: Biological Ontologies
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Light-Weighted Automatic Import of Standardized Ontologies into the Content Management System Drupal.
Studies in health technology and informatics
Jan 1, 2017
The amount of ontologies, which are utilizable for widespread domains, is growing steadily. BioPortal alone, embraces over 500 published ontologies with nearly 8 million classes. In contrast, the vast informative content of these ontologies is only d...
Expert2OWL: A Methodology for Pattern-Based Ontology Development.
Studies in health technology and informatics
Jan 1, 2017
The formalization of expert knowledge enables a broad spectrum of applications employing ontologies as underlying technology. These include eLearning, Semantic Web and expert systems. However, the manual construction of such ontologies is time-consum...
Technical Environment for Developing the SNIK Ontology of Information Management in Hospitals.
Studies in health technology and informatics
Jan 1, 2017
The SNIK project converts textbooks about information management in hospitals to a domain ontology that provides a shared vocabulary for institutions to model and integrate processes, data and infrastructure. To accommodate user groups with different...
Relational Algebra in Spatial Decision Support Systems Ontologies.
Studies in health technology and informatics
Jan 1, 2017
Decision Support Systems (DSS) is a powerful tool, for facilitates researchers to choose the correct decision based on their final results. Especially in medical cases where doctors could use these systems, to overcome the problem with the clinical m...
Pitfalls of Ontology in Medicine.
Studies in health technology and informatics
Jan 1, 2017
Much research has been done in the last few decades in clinical research, medicine, life sciences, etc. leading to an exponential increase in the generation of data. Managing this vast information not only requires integration of the data, but also a...
Semantic Technologies and Bio-Ontologies.
Methods in molecular biology (Clifton, N.J.)
Jan 1, 2017
As information available through data repositories constantly grows, the need for automated mechanisms for linking, querying, and sharing data has become a relevant factor both in research and industry. This situation is more evident in research fiel...
HL7 FHIR: Ontological Reinterpretation of Medication Resources.
Studies in health technology and informatics
Jan 1, 2017
"A solid ontology-based analysis with a rigorous formal mapping for correctness" is one of the ten reasons why the HL7 standard Fast Healthcare Interoperability Resources (FHIR) is advertised to be better than other standards for EHR interoperability...
The BioTop Family of Upper Level Ontological Resources for Biomedicine.
Studies in health technology and informatics
Jan 1, 2017
BioTop is a domain upper level ontology for the life sciences, based on OWL DL, introduced ten years ago. This paper provides an update of the current state of this resource, with a special focus on BioTop's top level, BioTopLite, which currently con...
Ontological Realism for the Research Domain Criteria for Mental Disorders.
Studies in health technology and informatics
Jan 1, 2017
At the heart of the Research Domain Criteria for Mental Disorders is a matrix in which functional aspects of behavior are related to genotypic and (endo-)phenotypic research findings, and the various techniques through which they can been observed. T...
Preliminary Analysis of the OBO Foundry Ontologies and Their Evolution Using OQuaRE.
Studies in health technology and informatics
Jan 1, 2017
The biomedical community has now developed a significant number of ontologies. The curation of biomedical ontologies is a complex task as they evolve rapidly, being new versions regularly published. Therefore, methods to support ontology developers i...
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