AIMC Topic: Drug Discovery

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A statistical comparison between Matthews correlation coefficient (MCC), prevalence threshold, and Fowlkes-Mallows index.

Journal of biomedical informatics
Even if assessing binary classifications is a common task in scientific research, no consensus on a single statistic summarizing the confusion matrix has been reached so far. In recent studies, we demonstrated the advantages of the Matthews correlati...

Faster and more diverse de novo molecular optimization with double-loop reinforcement learning using augmented SMILES.

Journal of computer-aided molecular design
Using generative deep learning models and reinforcement learning together can effectively generate new molecules with desired properties. By employing a multi-objective scoring function, thousands of high-scoring molecules can be generated, making th...

Quantum computing for near-term applications in generative chemistry and drug discovery.

Drug discovery today
In recent years, drug discovery and life sciences have been revolutionized with machine learning and artificial intelligence (AI) methods. Quantum computing is touted to be the next most significant leap in technology; one of the main early practical...

Leveraging Cell Painting Images to Expand the Applicability Domain and Actively Improve Deep Learning Quantitative Structure-Activity Relationship Models.

Chemical research in toxicology
The search for chemical hit material is a lengthy and increasingly expensive drug discovery process. To improve it, ligand-based quantitative structure-activity relationship models have been broadly applied to optimize primary and secondary compound ...

A Simple Way to Incorporate Target Structural Information in Molecular Generative Models.

Journal of chemical information and modeling
Deep learning generative models are now being applied in various fields including drug discovery. In this work, we propose a novel approach to include target 3D structural information in molecular generative models for structure-based drug design. Th...

AI/ML in Precision Medicine: A Look Beyond the Hype.

Therapeutic innovation & regulatory science
Artificial Intelligence (AI) and Machine Learning (ML) are making headlines in medical research, especially in drug discovery, digital imaging, disease diagnostics, genetic testing, and optimal care pathway (personalized care). However, the potential...

Structure-Based Drug Discovery with Deep Learning.

Chembiochem : a European journal of chemical biology
Artificial intelligence (AI) in the form of deep learning has promise for drug discovery and chemical biology, for example, to predict protein structure and molecular bioactivity, plan organic synthesis, and design molecules de novo. While most of th...

Prediction of Human Organ Toxicity via Artificial Intelligence Methods.

Chemical research in toxicology
Unpredicted human organ level toxicity remains one of the major reasons for drug clinical failure. There is a critical need for cost-efficient strategies in the early stages of drug development for human toxicity assessment. At present, artificial in...

Deep learning-based classification model for GPR151 activator activity prediction.

BMC bioinformatics
BACKGROUND: GPR151 is a kind of protein belonging to G protein-coupled receptor family that is closely associated with a variety of physiological and pathological processes.The potential use of GPR151 as a therapeutic target for the management of met...

Artificial Intelligence for Computer-Aided Drug Discovery.

Drug research
The continuous implementation of Artificial Intelligence (AI) in multiple scientific domains and the rapid advancement in computer software and hardware, along with other parameters, have rapidly fuelled this development. The technology can contribut...