AIMC Topic: Electronic Health Records

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Automatic phenotyping of electronical health record: PheVis algorithm.

Journal of biomedical informatics
Electronic Health Records (EHRs) often lack reliable annotation of patient medical conditions. Phenorm, an automated unsupervised algorithm to identify patient medical conditions from EHR data, has been developed. PheVis extends PheNorm at the visit ...

Using deep learning and natural language processing models to detect child physical abuse.

Journal of pediatric surgery
BACKGROUND: The recognition of child physical abuse can be challenging and often requires a multidisciplinary assessment. Deep learning models, based on clinical characteristics, laboratory studies, and imaging findings, were developed to facilitate ...

French FastContext: A publicly accessible system for detecting negation, temporality and experiencer in French clinical notes.

Journal of biomedical informatics
The context of medical conditions is an important feature to consider when processing clinical narratives. NegEx and its extension ConText became the most well-known rule-based systems that allow determining whether a medical condition is negated, hi...

Incorporating multi-level CNN and attention mechanism for Chinese clinical named entity recognition.

Journal of biomedical informatics
Named entity recognition (NER) is a fundamental task in Chinese natural language processing (NLP) tasks. Recently, Chinese clinical NER has also attracted continuous research attention because it is an essential preparation for clinical data mining. ...

FeARH: Federated machine learning with anonymous random hybridization on electronic medical records.

Journal of biomedical informatics
Electrical medical records are restricted and difficult to centralize for machine learning model training due to privacy and regulatory issues. One solution is to train models in a distributed manner that involves many parties in the process. However...

Predicting opioid overdose risk of patients with opioid prescriptions using electronic health records based on temporal deep learning.

Journal of biomedical informatics
The US is experiencing an opioid epidemic, and opioid overdose is causing more than 100 deaths per day. Early identification of patients at high risk of Opioid Overdose (OD) can help to make targeted preventative interventions. We aim to build a deep...

Explainable automated coding of clinical notes using hierarchical label-wise attention networks and label embedding initialisation.

Journal of biomedical informatics
BACKGROUND: Diagnostic or procedural coding of clinical notes aims to derive a coded summary of disease-related information about patients. Such coding is usually done manually in hospitals but could potentially be automated to improve the efficiency...

A new approach to medical diagnostic decision support.

Journal of biomedical informatics
Data mining is a powerful tool to reduce costs and mitigate errors in the diagnostic analysis and repair of complex engineered system, but it has yet to be applied systematically to the most complex and socially expensive system - the human body. The...

Prediction of Drug-Induced Long QT Syndrome Using Machine Learning Applied to Harmonized Electronic Health Record Data.

Journal of cardiovascular pharmacology and therapeutics
BACKGROUND: Drug-induced QT prolongation is a potentially preventable cause of morbidity and mortality, however there are no widespread clinical tools utilized to predict which individuals are at greatest risk. Machine learning (ML) algorithms may pr...

Natural Language Processing and Machine Learning for Identifying Incident Stroke From Electronic Health Records: Algorithm Development and Validation.

Journal of medical Internet research
BACKGROUND: Stroke is an important clinical outcome in cardiovascular research. However, the ascertainment of incident stroke is typically accomplished via time-consuming manual chart abstraction. Current phenotyping efforts using electronic health r...