AIMC Topic: Minisatellite Repeats

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Prediction of Clonal Complexes from Multilocus Variable Number Tandem Repeat Analysis Patterns Using a Machine Learning Approach.

Foodborne pathogens and disease Jul 4, 2024
Multilocus variable number tandem repeat analysis (MLVA) is a molecular subtyping technique that remains useful for those without the resources to access whole genome sequencing for the tracking and tracing of bacterial contaminants. Unlike technique...
Machine Learning Food Microbiology Listeria monocytogenes Multilocus Sequence Typing Bacterial Typing Techniques Minisatellite Repeats
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Towards better prediction of Mycobacterium tuberculosis lineages from MIRU-VNTR data.

Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases Jun 28, 2018
The determination of lineages from strain-based molecular genotyping information is an important problem in tuberculosis. Mycobacterial interspersed repetitive unit-variable number tandem repeat (MIRU-VNTR) typing is a commonly used molecular genotyp...
Humans Machine Learning Phylogeny Computational Biology Tuberculosis Genetic Variation Mycobacterium tuberculosis Molecular Epidemiology Databases, Nucleic Acid New York City Interspersed Repetitive Sequences Minisatellite Repeats
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