AIMC Topic: Protein Conformation, beta-Strand

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The PSIPRED Protein Analysis Workbench: 20 years on.

Nucleic acids research Jul 2, 2019
The PSIPRED Workbench is a web server offering a range of predictive methods to the bioscience community for 20 years. Here, we present the work we have completed to update the PSIPRED Protein Analysis Workbench and make it ready for the next 20 year...
Software Protein Binding Proteins Models, Molecular Internet Amino Acid Sequence History, 21st Century Molecular Sequence Annotation Gene Ontology Binding Sites Sequence Alignment Sequence Homology, Amino Acid Protein Interaction Domains and Motifs Protein Conformation, alpha-Helical Protein Conformation, beta-Strand
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mCSM-PPI2: predicting the effects of mutations on protein-protein interactions.

Nucleic acids research Jul 2, 2019
Protein-protein Interactions are involved in most fundamental biological processes, with disease causing mutations enriched at their interfaces. Here we present mCSM-PPI2, a novel machine learning computational tool designed to more accurately predic...
Humans Machine Learning Software Protein Binding Proteins Internet Benchmarking Datasets as Topic Crystallography, X-Ray Binding Sites Thermodynamics Mutation, Missense Protein Interaction Mapping Protein Interaction Domains and Motifs Protein Conformation, alpha-Helical Protein Conformation, beta-Strand
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PrankWeb: a web server for ligand binding site prediction and visualization.

Nucleic acids research Jul 2, 2019
PrankWeb is an online resource providing an interface to P2Rank, a state-of-the-art method for ligand binding site prediction. P2Rank is a template-free machine learning method based on the prediction of local chemical neighborhood ligandability cent...
Humans Machine Learning Software Protein Binding Proteins Internet Benchmarking Amino Acid Sequence Ligands Datasets as Topic Binding Sites Thermodynamics Protein Interaction Domains and Motifs Protein Conformation, alpha-Helical Protein Conformation, beta-Strand
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