AIMC Topic: RNA Virus Infections

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PACIFIC: a lightweight deep-learning classifier of SARS-CoV-2 and co-infecting RNA viruses.

Scientific reports Feb 5, 2021
Viral co-infections occur in COVID-19 patients, potentially impacting disease progression and severity. However, there is currently no dedicated method to identify viral co-infections in patient RNA-seq data. We developed PACIFIC, a deep-learning alg...
Humans Neural Networks, Computer COVID-19 SARS-CoV-2 Sensitivity and Specificity Deep Learning RNA-Seq Coinfection COVID-19 Testing Orthomyxoviridae RNA Viruses RNA Virus Infections Coronaviridae Metapneumovirus Rhinovirus
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Predicting reservoir hosts and arthropod vectors from evolutionary signatures in RNA virus genomes.

Science (New York, N.Y.) Nov 2, 2018
Identifying the animal origins of RNA viruses requires years of field and laboratory studies that stall responses to emerging infectious diseases. Using large genomic and ecological datasets, we demonstrate that animal reservoirs and the existence an...
Humans Machine Learning Animals Genomics Evolution, Molecular Biodiversity Host-Pathogen Interactions Genome, Viral Epidemiological Monitoring RNA Viruses Disease Reservoirs Arthropod Vectors Communicable Diseases, Emerging RNA Virus Infections
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