AIMC Topic: Zea mays

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Predicting phenotypes from genetic, environment, management, and historical data using CNNs.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik
Convolutional Neural Networks (CNNs) can perform similarly or better than standard genomic prediction methods when sufficient genetic, environmental, and management data are provided. Predicting phenotypes from genetic (G), environmental (E), and man...

Robotic Assay for Drought (RoAD): an automated phenotyping system for brassinosteroid and drought responses.

The Plant journal : for cell and molecular biology
Brassinosteroids (BRs) are a group of plant steroid hormones involved in regulating growth, development, and stress responses. Many components of the BR pathway have previously been identified and characterized. However, BR phenotyping experiments ar...

Predicting moisture content during maize nixtamalization using machine learning with NIR spectroscopy.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik
Moisture content during nixtamalization can be accurately predicted from NIR spectroscopy when coupled with a support vector machine (SVM) model, is strongly modulated by the environment, and has a complex genetic architecture. Lack of high-throughpu...

3D Reconstruction of Non-Rigid Plants and Sensor Data Fusion for Agriculture Phenotyping.

Sensors (Basel, Switzerland)
Technology has been promoting a great transformation in farming. The introduction of robotics; the use of sensors in the field; and the advances in computer vision; allow new systems to be developed to assist processes, such as phenotyping, of crop's...

A spectral characteristic analysis method for distinguishing heavy metal pollution in crops: VMD-PCA-SVM.

Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy
Exploring the characteristics and types of heavy metal pollution in crops has important implications for food security and human health. In this study, a method for distinguishing heavy metal-polluted elements in corn leaves was proposed. Based on th...

Coupling machine learning and crop modeling improves crop yield prediction in the US Corn Belt.

Scientific reports
This study investigates whether coupling crop modeling and machine learning (ML) improves corn yield predictions in the US Corn Belt. The main objectives are to explore whether a hybrid approach (crop modeling + ML) would result in better predictions...

iPTT(2 L)-CNN: A Two-Layer Predictor for Identifying Promoters and Their Types in Plant Genomes by Convolutional Neural Network.

Computational and mathematical methods in medicine
A promoter is a short DNA sequence near to the start codon, responsible for initiating transcription of a specific gene in genome. The accurate recognition of promoters has great significance for a better understanding of the transcriptional regulati...

sgRNACNN: identifying sgRNA on-target activity in four crops using ensembles of convolutional neural networks.

Plant molecular biology
We proposed an ensemble convolutional neural network model to identify sgRNA high on-target activity in four crops and we used one-hot encoding and k-mers for sequence encoding. As an important component of the CRISPR/Cas9 system, single-guide RNA (s...

Weed and Corn Seedling Detection in Field Based on Multi Feature Fusion and Support Vector Machine.

Sensors (Basel, Switzerland)
Detection of weeds and crops is the key step for precision spraying using the spraying herbicide robot and precise fertilization for the agriculture machine in the field. On the basis of k-mean clustering image segmentation using color information an...

Predicting functions of maize proteins using graph convolutional network.

BMC bioinformatics
BACKGROUND: Maize (Zea mays ssp. mays L.) is the most widely grown and yield crop in the world, as well as an important model organism for fundamental research of the function of genes. The functions of Maize proteins are annotated using the Gene Ont...