AIMC Topic: RNA, Long Noncoding

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Construction of a diagnostic model for tuberculosis based on long non-coding RNA.

Annals of medicine
BACKGROUND: The World Health Organization encourages the development of novel diagnostic tools based on 'non-sputum' samples to meet global goals for tuberculosis (TB) control. We aimed to develop a machine learning-driven model for TB diagnosis, usi...

FLYNC: a machine-learning-driven framework for discovering long noncoding RNAs in Drosophila melanogaster.

NAR genomics and bioinformatics
Noncoding RNAs have increasingly recognized roles in critical molecular mechanisms of disease. However, the noncoding genome of Drosophila melanogaster, one of the most powerful disease model organisms, has been understudied. Here, we present FLYNC-F...

A novel prognostic model for lung squamous cell carcinoma based on multi-omics analysis and machine learning.

PloS one
Lung squamous-cell carcinoma (LUSC) is a highly aggressive malignancy with a poor prognosis. Tertiary lymphoid structures (TLS) play a crucial role in the immune response and significantly influence the efficacy of immunotherapy. However, the prognos...

Deep Learning-Assisted G4 Nanowire-Enhanced Carbon Dot Biosensor for Exosomal LncRNA Artificial Intelligence Diagnosis.

Analytical chemistry
Exosomal long noncoding RNAs (lncRNA) have significant potential as a biomarker for early cancer diagnosis. Accurate and sensitive detection of this abnormal expression remains challenging. Herein, we develop an innovative dual-mode photoelectrochemi...

Circulating long non-coding RNAs as predictors of type 2 diabetes mellitus development: results from the CORDIOPREV study.

Cardiovascular diabetology
BACKGROUND: Type 2 diabetes mellitus (T2DM) is a growing global health challenge. Conventional diagnostic tools have limited sensitivity and specificity for early-stage disease. In this context, long non-coding RNAs (lncRNAs) have emerged as promisin...

ceRNA regulatory network and immune-neurodegenerative mechanisms of peripheral CD4+ T cells in parkinson's disease.

PloS one
Parkinson's disease (PD) is a neurodegenerative disorder characterized by dopaminergic neuron loss and neuroinflammation, with emerging roles of peripheral immune dysregulation in disease progression. This study aimed to investigate the regulatory ne...

Association of blood-based DNA methylation of lncRNAs with Alzheimer's disease diagnosis.

Clinical epigenetics
BACKGROUND: DNA methylation has shown great potential in Alzheimer's disease (AD) blood diagnosis. However, the ability of long non-coding RNAs (lncRNAs), which can be modified by DNA methylation, to serve as noninvasive biomarkers for AD diagnosis r...

Identification and validation of biomarkers associated with cellular senescence and demethylation in acute myocardial infarction.

Scientific reports
Acute myocardial infarction (AMI) triggered cardiomyocyte senescence and impaired cardiac function. Methylation modifications and related enzymes in patients were also significantly altered, but the association between cellular senescence and demethy...

Revealing new associations between lncRNAs and diseases through cross attention mechanism and multiple level feature fusion.

Scientific reports
Revealing new lncRNA-disease associations (LDAs) is necessary to decipher pathological mechanisms and find new clues of diagnosis and therapy for complex diseases. However, experimental methods for LDA identification need a significant amount of time...

Machine learning and multi-omics integration reveal TRPV2 as a central regulator in bicuspid aortic valve calcification.

Biochemical and biophysical research communications
BACKGROUND: Bicuspid aortic valve (BAV), the most common congenital heart defect, is strongly predisposed to early calcification, yet the molecular drivers remain poorly defined. This study aims to identify the functional role of transient receptor p...