BPEN: Brain Posterior Evidential Network for trustworthy brain imaging analysis.

Journal: Neural networks : the official journal of the International Neural Network Society
Published Date:

Abstract

The application of deep learning techniques to analyze brain functional magnetic resonance imaging (fMRI) data has led to significant advancements in identifying prospective biomarkers associated with various clinical phenotypes and neurological conditions. Despite these achievements, the aspect of prediction uncertainty has been relatively underexplored in brain fMRI data analysis. Accurate uncertainty estimation is essential for trustworthy learning, given the challenges associated with brain fMRI data acquisition and the potential diagnostic implications for patients. To address this gap, we introduce a novel posterior evidential network, named the Brain Posterior Evidential Network (BPEN), designed to capture both aleatoric and epistemic uncertainty in the analysis of brain fMRI data. We conducted comprehensive experiments using data from the Alzheimer's Disease Neuroimaging Initiative (ADNI) and ADNI-depression (ADNI-D) cohorts, focusing on predictions for mild cognitive impairment (MCI) and depression across various diagnostic groups. Our experiments not only unequivocally demonstrate the superior predictive performance of our BPEN model compared to existing state-of-the-art methods but also underscore the importance of uncertainty estimation in predictive models.

Authors

  • Kai Ye
    MandalaT Software Corporation, F5, Wuxi, China.
  • Haoteng Tang
    Department of Electrical and Computer Engineering, University of Pittsburgh, 3700 O'Hara St, Pittsburgh, PA, 15260, USA. Electronic address: hat64@pitt.edu.
  • Siyuan Dai
    Department of Electrical and Computer Engineering, University of Pittsburgh, Pittsburgh, 15260, PA, USA.
  • Igor Fortel
    Department of Biomedical Engineering, University of Illinois at Chicago, Chicago, 60607, IL, USA.
  • Paul M Thompson
    Imaging Genetics Center, Mark and Mary Stevens Neuroimaging and Informatics Institute, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
  • R Scott Mackin
    Department of Psychiatry and Behavioral Sciences, University of California San Francisco, San Francisco, 94143, CA, USA.
  • Alex Leow
    Department of Biomedical Engineering, University of Illinois at Chicago, Chicago, 60607, IL, USA; Department of Psychiatry, University of Illinois at Chicago, Chicago, 60607, IL, USA; Department of Computer Science, University of Illinois at Chicago, Chicago, 60607, IL, USA.
  • Heng Huang
    Department of Electrical and Computer Engineering, University of Pittsburgh, Pittsburgh, USA.
  • Liang Zhan
    Department of Electrical and Computer Engineering, University of Pittsburgh, Pittsburgh, PA 15261, USA; Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA 15261, USA.