ELTIRADS framework for thyroid nodule classification integrating elastography, TIRADS, and radiomics with interpretable machine learning.

Journal: Scientific reports
PMID:

Abstract

Early detection of malignant thyroid nodules is crucial for effective treatment, but traditional diagnostic methods face challenges such as variability in expert opinions and limited integration of advanced imaging techniques. This prospective cohort study investigates a novel multimodal approach, integrating traditional methods with advanced machine learning techniques. We studied 181 patients who underwent fine-needle aspiration (FNA) biopsy, each contributing one nodule, resulting in a total of 181 nodules for our analysis. Data collection included sex, age, and ultrasound imaging, which incorporated elastography. Features extracted from these images included Thyroid Imaging Reporting and Data System (TIRADS) scores, elastography parameters, and radiomic features. The pathological results based on the FNA biopsy, provided by the pathologists, served as our gold standard for nodule classification. Our methodology, termed ELTIRADS, combines these features with interpretable machine learning techniques. Performance evaluation showed that a Support Vector Machine (SVM) classifier using TIRADS, elastography data, and radiomic features achieved high accuracy (0.92), with sensitivity (0.89), specificity (0.94), precision (0.89), and F1 score (0.89). To enhance interpretability, we used hierarchical clustering, shapley additive explanations (SHAP), and partial dependence plots (PDP). This combined approach holds promise for enhancing the accuracy of thyroid nodule malignancy detection, thereby contributing to advancements in personalized and precision medicine in the field of thyroid cancer research.

Authors

  • Erfan Barzegar-Golmoghani
    Department of Biomedical Engineering, Tarbiat Modares University, Tehran, Iran.
  • Mobin Mohebi
    Department of Biomedical Engineering, Tarbiat Modares University, Tehran, Iran.
  • Zahra Gohari
    Department of Radiology, Tehran University of Medical Science, Tehran, Iran.
  • Sadaf Aram
    Department of Biomedical Engineering, Tarbiat Modares University, Tehran, Iran.
  • Ali Mohammadzadeh
    Cardiovascular Research Center, Rajaie Cardiovascular, Medical, and Research Center, University of Medical Sciences, Tehran, Iran. mralimohammadzadeh@yahoo.com.
  • Sina Firouznia
    Second Faculty of Medicine, Charles University, Prague, Czech Republic.
  • Madjid Shakiba
    Advanced Diagnostic and Interventional Radiology Research Center (ADIR), Tehran University of Medical Sciences, Tehran, Iran.
  • Hamed Naghibi
    Advanced Diagnostic and Interventional Radiology Research Center (ADIR), Tehran University of Medical Sciences, Tehran, Iran.
  • Sadegh Moradian
    Department of Radiology, Kermanshah University of Medical Sciences, Kermanshah, Iran.
  • Maryam Ahmadi
    Department of Health Information Management, School of Management and Medical Information Sciences, Iran University of Medical Sciences, Tehran, Iran.
  • Kazhal Almasi
    Department of Biomedical Engineering, Tarbiat Modares University, Tehran, Iran.
  • Mahbod Issaiy
    Advanced Diagnostic and Interventional Radiology Research Center (ADHR), Tehran University of Medical Sciences, Tehran, Iran.
  • Mehran Anjomrooz
    Department of Radiology, Tehran University of Medical Science, Tehran, Iran.
  • Seyed Mohammad Tavangar
    Department of Pathology, Tehran University of Medical Sciences, Tehran, Iran.
  • Sheida Javadi
    Advanced Diagnostic and Interventional Radiology Research Center (ADIR), Tehran University of Medical Sciences, Tehran, Iran.
  • Ahmad Bitarafan-Rajabi
    Cardiovascular Intervention Research Center, Rajaie Cardiovascular Medical and Research Center, Iran University of Medical Sciences, Tehran, Iran; Echocardiography Research Center, Rajaie Cardiovascular Medical and Research Center, Iran University of Medical Sciences, Tehran, Iran.
  • Mohammad Davoodi
    Department of Radiology, Tehran University of Medical Science, Tehran, Iran. mohammaddavoodi47@yahoo.com.
  • Hashem Sharifian
    Department of Radiology, Tehran University of Medical Science, Tehran, Iran. hashemsharifian@gmail.com.
  • Maryam Mohammadzadeh
    Department of Radiology, Tehran University of Medical Sciences, Tehran, Iran.