Machine learning identifies KRT8 dysregulation and endothelial remodeling in Moyamoya disease.

Journal: Scientific reports
Published Date:

Abstract

Moyamoya disease (MMD) is a rare occlusive cerebrovascular disease, and its pathological mechanism remains unclear at present. The abnormal vascular remodeling may be involved in vascular endothelial cells. In this study, RNA seq was performed on the superficial temporal arteries of 10 patients with MMD. Integrated analysis was conducted by combining validation set with training set. Key genes were identified through differential analysis and WGCNA. The functions of potential biomarkers were explored by methods such as correlation analysis, KEGG analysis, PPI network, and tube formation experiments. Integrated analysis of three cohorts (43 MMD vs. 26 controls) identified 19 shared DEGs, including upregulated KRT8/KRT18 and downregulated NT5C2 (P < 0.001). Enrichment revealed dysregulation in circadian rhythm, calcium signaling, and metabolic pathways (P < 0.05). Immune infiltration showed elevated pro-inflammatory cells (neutrophils, M1 macrophages) and reduced Tregs/NK cells (P < 0.05). Machine learning (SVM-RFE, Boruta, LASSO) prioritized KRT8 as diagnostic markers (AUC > 0.96). KRT8 overexpression enhanced angiogenesis in HBMECs (1.5-fold tube formation, P < 0.01). This omics approach delineates MMD's molecular interplay between inflammation, metabolism, and vascular remodeling. KRT8 may promote vascular remodeling in MMD by regulating the tube-forming ability of endothelial cells. This could be a highlight of therapeutic targets for MMD and shed light on the mechanism research of MMD.

Authors

  • Zhiguang Han
    Department of Neurosurgery, The First Hospital of Qinhuangdao, Hebei, 066002, China.
  • Jialong Yuan
    School of Computer and Artificial Intelligence, School of Alibaba Cloud Big Data, School of Software, Changzhou University, Changzhou 213100, China.
  • Zhenyu Zhou
    Key Laboratory of Brain-Like Neuromorphic Devices and Systems of Hebei Province, College of Electronic and Information Engineering, Hebei University, Baoding 071002, People's Republic of China. xiaobing_yan@126.com.
  • Yutong Liu
    School of Economics and Management, Communication University of China, Beijing 100024, China.
  • Chengxu Lei
    Department of Neurosurgery, Peking Union Medical College Hospital, Peking Union Medical College, Chinese Academy of Medical Sciences, Beijing, 100730, China.
  • Xun Ye
    Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing, 100070, China.
  • Yuanli Zhao
    China National Clinical Research Center for Neurological Diseases, Beijing, China.
  • Shihao He
    Department of Neurosurgery, Peking Union Medical College Hospital, Peking Union Medical College, Chinese Academy of Medical Sciences, Beijing, 100730, China. heshihaoo@outlook.com.