AIMC Topic: Information Storage and Retrieval

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A review of biomedical datasets relating to drug discovery: a knowledge graph perspective.

Briefings in bioinformatics Nov 19, 2022
Drug discovery and development is a complex and costly process. Machine learning approaches are being investigated to help improve the effectiveness and speed of multiple stages of the drug discovery pipeline. Of these, those that use Knowledge Graph...
Machine Learning Pattern Recognition, Automated Knowledge Information Storage and Retrieval Drug Discovery
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A scoping review of publicly available language tasks in clinical natural language processing.

Journal of the American Medical Informatics Association : JAMIA Sep 12, 2022
OBJECTIVE: To provide a scoping review of papers on clinical natural language processing (NLP) shared tasks that use publicly available electronic health record data from a cohort of patients.
Information Storage and Retrieval Data Collection Electronic Health Records Humans Data Management Natural Language Processing
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Chinese medical dialogue information extraction via contrastive multi-utterance inference.

Briefings in bioinformatics Jul 18, 2022
Medical Dialogue Information Extraction (MDIE) is a promising task for modern medical care systems, which greatly facilitates the development of many real-world applications such as electronic medical record generation, automatic disease diagnosis, e...
Electronic Health Records Benchmarking Information Storage and Retrieval China Deep Learning
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Assessment of Electronic Health Record for Cancer Research and Patient Care Through a Scoping Review of Cancer Natural Language Processing.

JCO clinical cancer informatics Jul 1, 2022
PURPOSE: The advancement of natural language processing (NLP) has promoted the use of detailed textual data in electronic health records (EHRs) to support cancer research and to facilitate patient care. In this review, we aim to assess EHR for cancer...
Information Storage and Retrieval Patient Care Electronic Health Records Humans Natural Language Processing Neoplasms
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A Natural Language Processing Tool Offering Data Extraction for COVID-19 Related Information (DECOVRI).

Studies in health technology and informatics Jun 6, 2022
A new natural language processing (NLP) application for COVID-19 related information extraction from clinical text notes is being developed as part of our pandemic response efforts. This NLP application called DECOVRI (Data Extraction for COVID-19 Re...
Ecosystem Electronic Health Records Information Storage and Retrieval Pandemics Natural Language Processing Humans COVID-19
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Representation and Normalization of Complex Interventions for Evidence Computing.

Studies in health technology and informatics Jun 6, 2022
Complex interventions are ubiquitous in healthcare. A lack of computational representations and information extraction solutions for complex interventions hinders accurate and efficient evidence synthesis. In this study, we manually annotated and ana...
Natural Language Processing Information Storage and Retrieval Humans
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Automated information extraction from free-text medical documents for stroke key performance indicators: a pilot study.

Internal medicine journal Feb 1, 2022
Automated information extraction might be able to assist with the collection of stroke key performance indicators (KPI). The feasibility of using natural language processing for classification-based KPI and datetime field extraction was assessed. Usi...
Natural Language Processing Pilot Projects Information Storage and Retrieval Stroke Machine Learning Humans Electronic Health Records
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Technology Trends and Challenges for Large-Scale Scientific Visualization.

IEEE computer graphics and applications Jan 1, 2022
Scientific visualization is a key approach to understanding the growing massive streams of data from scientific simulations and experiments. In this article, I review technology trends including the positive effects of Moore's law on science, the sig...
Technology Machine Learning Information Storage and Retrieval
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BioBERT and Similar Approaches for Relation Extraction.

Methods in molecular biology (Clifton, N.J.) Jan 1, 2022
In biomedicine, facts about relations between entities (disease, gene, drug, etc.) are hidden in the large trove of 30 million scientific publications. The curated information is proven to play an important role in various applications such as drug r...
PubMed Natural Language Processing Information Storage and Retrieval Publications Language
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Optimal vocabulary selection approaches for privacy-preserving deep NLP model training for information extraction and cancer epidemiology.

Cancer biomarkers : section A of Disease markers Jan 1, 2022
BACKGROUND: With the use of artificial intelligence and machine learning techniques for biomedical informatics, security and privacy concerns over the data and subject identities have also become an important issue and essential research topic. Witho...
Neoplasms Deep Learning Artificial Intelligence Confidentiality Humans Registries Information Storage and Retrieval Natural Language Processing
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