AIMC Topic: Organic Chemicals

Clear Filters Showing 51 to 60 of 97 articles

Support vector machine-based model for toxicity of organic compounds against fish.

Regulatory toxicology and pharmacology : RTP
Predicting the toxicity of chemicals to various fish species through chemometric approach is crucial for ecotoxicological assessment of existing as well as not yet synthesized chemicals. This paper reports a quantitative structure-activity/toxicity r...

ML-DTI: Mutual Learning Mechanism for Interpretable Drug-Target Interaction Prediction.

The journal of physical chemistry letters
Deep learning (DL) provides opportunities for the identification of drug-target interactions (DTIs). The challenges of applying DL lie primarily with the lack of interpretability. Also, most of the existing DL-based methods formulate the drug and tar...

Epigenetic Target Fishing with Accurate Machine Learning Models.

Journal of medicinal chemistry
Epigenetic targets are of significant importance in drug discovery research, as demonstrated by the eight approved epigenetic drugs for treatment of cancer and the increasing availability of chemogenomic data related to epigenetics. This data represe...

Relating molecular descriptors to frontier orbital energy levels, singlet and triplet excited states of fused tricyclics using machine learning.

Journal of molecular graphics & modelling
Fused tricyclic organic compounds are an important class of organic electronic materials. In designing molecules for organic electronics, knowing what chemical structure that be used to tune the molecular property is one of the keys that can help to ...

Towards Deep Neural Network Models for the Prediction of the Blood-Brain Barrier Permeability for Diverse Organic Compounds.

Molecules (Basel, Switzerland)
Permeation through the blood-brain barrier (BBB) is among the most important processes controlling the pharmacokinetic properties of drugs and other bioactive compounds. Using the fragmental (substructural) descriptors representing the occurrence num...

Quantum machine learning using atom-in-molecule-based fragments selected on the fly.

Nature chemistry
First-principles-based exploration of chemical space deepens our understanding of chemistry and might help with the design of new molecules, materials or experiments. Due to the computational cost of quantum chemistry methods and the immense number o...

Quantitative structure-property relationship of distribution coefficients of organic compounds.

SAR and QSAR in environmental research
The -octanol/buffer solution distribution coefficient (or -octanol/water partition coefficient) is of critical importance for measuring lipophilicity of drug candidates. After 4885 molecular descriptor generation, 15 molecular descriptors were select...

High-Throughput and Autonomous Grazing Incidence X-ray Diffraction Mapping of Organic Combinatorial Thin-Film Library Driven by Machine Learning.

ACS combinatorial science
High-throughput X-ray diffraction (XRD) is one of the most indispensable techniques to accelerate materials research. However, the conventional XRD analysis with a large beam spot size may not best appropriate in a case for characterizing organic mat...

Retip: Retention Time Prediction for Compound Annotation in Untargeted Metabolomics.

Analytical chemistry
Unidentified peaks remain a major problem in untargeted metabolomics by LC-MS/MS. Confidence in peak annotations increases by combining MS/MS matching and retention time. We here show how retention times can be predicted from molecular structures. Tw...

Learning Molecular Representations for Medicinal Chemistry.

Journal of medicinal chemistry
The accurate modeling and prediction of small molecule properties and bioactivities depend on the critical choice of molecular representation. Decades of informatics-driven research have relied on expert-designed molecular descriptors to establish qu...